Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN3O15551 AC063976.3-201ENST00000426849 329 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN3O15551 USP9YP11-201ENST00000427537 717 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 AC008850.1-201ENST00000427546 362 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 AC112220.1-201ENST00000434628 355 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 ARPC3P1-201ENST00000437218 533 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 EEF1A1P39-201ENST00000440791 250 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN3O15551 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CLDN3O15551 SNORD121B-201ENST00000458838 81 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 SNORD109B-201ENST00000458961 67 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 SNORD109A-201ENST00000459128 67 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 RPL30P9-201ENST00000465586 330 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 MTND4LP3-201ENST00000468320 276 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 SNORA31.21-201ENST00000517180 77 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 RNU6-840P-201ENST00000517275 65 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN3O15551 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN3O15551 AC124947.2-202ENST00000552735 133 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 CYCSP2-201ENST00000558168 301 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.96□□□□□ -1.94
CLDN3O15551 MTCYBP23-201ENST00000558717 1102 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN3O15551 DUXAP3-201ENST00000603616 594 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 AL035413.2-201ENST00000604801 525 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 AL133507.1-201ENST00000605269 557 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.96□□□□□ -1.94
CLDN3O15551 AC110079.1-202ENST00000635213 138 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 MIR6733-201ENST00000635723 61 ntBASIC2.96□□□□□ -1.94
CLDN3O15551 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN3O15551 Y_RNA.111-201ENST00000363248 100 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 RNU5E-8P-201ENST00000363502 116 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 Y_RNA.311-201ENST00000365068 96 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 SNORA36C-201ENST00000384289 132 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN3O15551 MIR1284-201ENST00000408337 120 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 RPS3AP37-201ENST00000419176 745 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AC019097.1-201ENST00000424783 735 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN3O15551 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN3O15551 MTND5P14-201ENST00000441481 1267 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN3O15551 ZNF886P-201ENST00000450781 723 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN3O15551 MEMO1P3-201ENST00000459811 302 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AC090525.1-201ENST00000479116 478 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AC109445.1-201ENST00000512356 383 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 SCARNA15.2-201ENST00000516409 127 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN3O15551 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN3O15551 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.95□□□□□ -1.94
CLDN3O15551 MIR4319-201ENST00000577285 85 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 OR2AS2P-201ENST00000606902 342 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AL603758.1-201ENST00000618654 241 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AC109809.1-201ENST00000619665 545 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AC116618.1-201ENST00000634617 774 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.95□□□□□ -1.94
CLDN3O15551 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN3O15551 SDAD1P2-201ENST00000441308 2028 ntBASIC2.95□□□□□ -1.94
CLDN3O15551 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN3O15551 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN3O15551 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN3O15551 SNORD21-201ENST00000383953 95 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 Y_RNA.510-201ENST00000384511 114 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 AL356421.1-201ENST00000403255 413 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 RNA5SP184-201ENST00000411071 108 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN3O15551 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN3O15551 ATP5F1P1-201ENST00000433775 569 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN3O15551 AC129850.1-201ENST00000436203 508 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 RPL21P2-201ENST00000440049 481 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 MTND1P31-201ENST00000449206 961 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN3O15551 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN3O15551 AL590639.1-201ENST00000456484 337 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 AC103975.1-201ENST00000482506 483 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN3O15551 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN3O15551 AL133271.1-201ENST00000538229 291 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 AC090888.1-201ENST00000561335 1141 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 HMGB1P6-201ENST00000569046 646 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN3O15551 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN3O15551 AC008739.2-201ENST00000597006 317 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN3O15551 AC006270.3-201ENST00000605967 1036 ntBASIC2.94□□□□□ -1.94
CLDN3O15551 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CLDN3O15551 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLDN3O15551 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN3O15551 AC062016.1-201ENST00000355719 319 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 RNU6-859P-201ENST00000362728 107 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 RNU6-359P-201ENST00000365466 108 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 RNU6-637P-201ENST00000384050 107 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 AL136310.1-201ENST00000404926 654 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 RNU2-52P-201ENST00000410680 190 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 MTATP6P20-201ENST00000414147 562 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN3O15551 HMGN2P30-201ENST00000423237 256 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms