Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 MTATP6P15-201ENST00000527233 835 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.07□□□□□ -1.76
NPHP1O15259 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.07□□□□□ -1.76
NPHP1O15259 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.07□□□□□ -1.76
NPHP1O15259 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.07□□□□□ -1.76
NPHP1O15259 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.07□□□□□ -1.76
NPHP1O15259 AC112187.2-201ENST00000604345 283 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 AC107214.2-201ENST00000608204 634 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 AC012150.2-201ENST00000621300 544 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 AC006111.3-201ENST00000622137 383 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 AP000676.3-201ENST00000623299 569 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 AP000770.2-201ENST00000623694 100 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.07□□□□□ -1.76
NPHP1O15259 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPHP1O15259 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.07□□□□□ -1.76
NPHP1O15259 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPHP1O15259 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.06□□□□□ -1.76
NPHP1O15259 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.06□□□□□ -1.76
NPHP1O15259 AL138713.1-201ENST00000624026 2130 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 RNU6-283P-201ENST00000364788 107 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 AC008850.1-201ENST00000427546 362 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AC092573.2-201ENST00000434546 243 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.06□□□□□ -1.76
NPHP1O15259 RPL36AP33-201ENST00000450395 310 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.06□□□□□ -1.76
NPHP1O15259 ATG12P2-201ENST00000456830 416 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 RPL30P14-201ENST00000482744 348 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.06□□□□□ -1.76
NPHP1O15259 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.06□□□□□ -1.76
NPHP1O15259 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.06□□□□□ -1.76
NPHP1O15259 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.06□□□□□ -1.76
NPHP1O15259 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.06□□□□□ -1.76
NPHP1O15259 HMGN1P28-201ENST00000521340 364 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.06□□□□□ -1.76
NPHP1O15259 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.06□□□□□ -1.76
NPHP1O15259 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 H3F3AP1-201ENST00000559984 334 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.06□□□□□ -1.76
NPHP1O15259 AC005951.2-201ENST00000576282 495 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 MIR4425-201ENST00000580572 84 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 MIR4307-201ENST00000582802 84 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AL139344.1-201ENST00000605228 195 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 OR2AS2P-201ENST00000606902 342 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 RMST_8.1-201ENST00000610287 165 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 uc_338.1-201ENST00000612113 180 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AC093838.1-201ENST00000613014 469 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 TUG1_2.1-201ENST00000614234 87 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AC022149.2-201ENST00000621061 203 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AC027309.3-201ENST00000623419 351 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 AC091965.5-201ENST00000624785 342 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 MAPK10-322ENST00000641485 4530 ntBASIC4.06□□□□□ -1.76
NPHP1O15259 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPHP1O15259 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.05□□□□□ -1.76
NPHP1O15259 AC092125.1-201ENST00000562568 1995 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPHP1O15259 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPHP1O15259 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
NPHP1O15259 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NPHP1O15259 RNU6-500P-201ENST00000362349 107 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 AC234781.2-201ENST00000426370 994 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 AL356867.1-201ENST00000429623 299 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.05□□□□□ -1.76
NPHP1O15259 TAAR7P-201ENST00000436141 242 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 FTH1P1-201ENST00000437933 532 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.05□□□□□ -1.76
NPHP1O15259 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.05□□□□□ -1.76
NPHP1O15259 SNORA31.1-201ENST00000515993 133 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 SNORA31.5-201ENST00000516190 133 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 RNU6-711P-201ENST00000517255 106 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.05□□□□□ -1.76
NPHP1O15259 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.05□□□□□ -1.76
NPHP1O15259 AC013553.2-201ENST00000604244 589 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 HSPE1P7-201ENST00000604681 321 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 AC091965.4-201ENST00000607691 587 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.05□□□□□ -1.76
NPHP1O15259 AC099506.2-201ENST00000623074 221 ntBASIC4.05□□□□□ -1.76
NPHP1O15259 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPHP1O15259 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.05□□□□□ -1.76
NPHP1O15259 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.05□□□□□ -1.76
NPHP1O15259 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPHP1O15259 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
NPHP1O15259 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPHP1O15259 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NPHP1O15259 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NPHP1O15259 Y_RNA.97-201ENST00000363094 102 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
NPHP1O15259 MIR19A-201ENST00000384878 82 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 AL136116.1-201ENST00000403591 381 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 AL356968.1-201ENST00000416622 474 ntBASIC4.04□□□□□ -1.76
NPHP1O15259 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms