Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 RNU6-227P-201ENST00000362865 103 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
CFAP99D6REC4 RNY1P5-201ENST00000383890 115 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 RNU6-1081P-201ENST00000384537 107 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 RNA5SP91-201ENST00000390902 119 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 AL022722.2-201ENST00000402519 180 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 COX6CP10-201ENST00000416832 224 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 HIGD1AP2-201ENST00000446367 280 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CFAP99D6REC4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 AC104164.2-201ENST00000496953 495 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 RNU6-1012P-201ENST00000516606 109 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 AC021678.3-201ENST00000517893 476 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 AC025755.1-201ENST00000521306 278 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 AP006245.1-201ENST00000522549 120 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 AC126615.2-201ENST00000553003 515 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 IGBP1P1-201ENST00000554337 1009 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 AC060780.2-201ENST00000589047 198 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 AL139395.1-201ENST00000603662 160 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 AC072026.1-201ENST00000605023 201 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
CFAP99D6REC4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
CFAP99D6REC4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 SMG1P6-201ENST00000532337 2930 ntBASIC5.68□□□□□ -1.5
CFAP99D6REC4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CFAP99D6REC4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.68□□□□□ -1.5
CFAP99D6REC4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CFAP99D6REC4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC010266.2-201ENST00000564741 3255 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 U3.10-201ENST00000364459 214 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 SNORD14B-201ENST00000364533 90 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 RN7SKP69-201ENST00000365390 305 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 MIR613-201ENST00000385248 95 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 SNORA53-201ENST00000391141 249 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 AL627311.1-201ENST00000431514 115 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 CYCSP6-201ENST00000434498 302 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 RPL32P33-201ENST00000487023 394 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 AL121603.1-201ENST00000553815 142 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC096996.1-201ENST00000563813 325 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC234771.5-201ENST00000600161 514 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 AL645944.1-201ENST00000603857 493 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 RN7SL544P-201ENST00000617232 284 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 RN7SL763P-201ENST00000620922 284 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC079776.5-201ENST00000641920 211 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CFAP99D6REC4 AL360270.2-201ENST00000562952 5985 ntBASIC5.67□□□□□ -1.5
CFAP99D6REC4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CFAP99D6REC4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 Y_RNA.44-201ENST00000362676 108 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 RNA5SP510-201ENST00000364697 99 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 MIR130A-201ENST00000385274 89 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms