Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.84□□□□□ -1.95
SRRM4A7MD48 RN7SL594P-201ENST00000470590 287 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC007537.2-201ENST00000472093 511 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 HMGN2P13-201ENST00000476476 274 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.84□□□□□ -1.95
SRRM4A7MD48 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.84□□□□□ -1.95
SRRM4A7MD48 SNORD59.2-201ENST00000516873 68 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 RPL12P22-201ENST00000519073 490 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
SRRM4A7MD48 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC002545.1-201ENST00000592511 181 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC119751.7-201ENST00000600494 245 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 AL031985.2-201ENST00000600955 480 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC138749.5-201ENST00000611461 208 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC090132.2-201ENST00000615881 347 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC116165.2-201ENST00000616705 206 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 AL357559.1-201ENST00000622228 274 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC025048.6-202ENST00000627667 438 ntBASIC2.84□□□□□ -1.95
SRRM4A7MD48 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.84□□□□□ -1.95
SRRM4A7MD48 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
SRRM4A7MD48 MTND4P5-201ENST00000435821 1374 ntBASIC2.84□□□□□ -1.96
SRRM4A7MD48 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.84□□□□□ -1.96
SRRM4A7MD48 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.84□□□□□ -1.96
SRRM4A7MD48 AC007785.2-201ENST00000598627 1916 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SRRM4A7MD48 FRG1CP-201ENST00000358464 769 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SRRM4A7MD48 MT-TH-201ENST00000387441 69 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 MTCYBP36-201ENST00000404146 440 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 Y_RNA.598-201ENST00000410480 95 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 RN7SKP140-201ENST00000411196 284 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 RNA5SP107-201ENST00000411358 122 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 ATP5A1P2-201ENST00000412323 255 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SRRM4A7MD48 AL031779.1-201ENST00000415663 330 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AL451054.2-201ENST00000420896 202 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AL159169.1-201ENST00000421119 127 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 USP9YP28-201ENST00000435142 589 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC005094.1-201ENST00000440420 368 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 NOTCH2P1-201ENST00000443481 624 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AL357552.1-201ENST00000445254 415 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 TAF9P1-201ENST00000445421 515 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AL360221.1-201ENST00000445989 335 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 COX6CP12-201ENST00000446748 202 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 HMGB3P8-201ENST00000449709 577 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 TAF9P2-201ENST00000454958 515 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC013267.1-201ENST00000458227 267 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 RPL37P6-201ENST00000460682 294 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 KCTD9P5-201ENST00000504141 1170 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 AF131216.2-201ENST00000512316 564 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 RNU6-711P-201ENST00000517255 106 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 NRON-201ENST00000517270 370 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC022616.6-201ENST00000520479 119 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC011602.1-201ENST00000546484 331 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC123904.3-201ENST00000547218 814 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 TGIF1P1-201ENST00000558095 802 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC034105.3-201ENST00000565294 442 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 ROCK1P1-201ENST00000573767 549 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 MIR3682-201ENST00000581338 84 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 AL161729.4-201ENST00000604650 476 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC064872.1-201ENST00000604823 1072 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AL031775.1-201ENST00000607014 887 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 BX664608.1-201ENST00000610519 487 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC013562.2-201ENST00000611632 603 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC073114.1-201ENST00000612027 490 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC027807.2-201ENST00000616099 408 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 uc_338.12-201ENST00000616344 181 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC026585.1-201ENST00000619582 524 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 U4.6-201ENST00000621618 127 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 AP003355.3-201ENST00000623465 114 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SRRM4A7MD48 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SRRM4A7MD48 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SRRM4A7MD48 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SRRM4A7MD48 AC110774.1-201ENST00000623567 2018 ntBASIC2.83□□□□□ -1.96
SRRM4A7MD48 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SRRM4A7MD48 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SRRM4A7MD48 AL137003.2-201ENST00000606924 2538 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 AL049641.1-201ENST00000441055 1948 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 RNA5SP479-201ENST00000364858 117 ntBASIC2.82□□□□□ -1.96
SRRM4A7MD48 Y_RNA.505-201ENST00000384489 102 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms