Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP17L3A6NCW0 AC093849.1-201ENST00000563631 2209 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC083843.2-201ENST00000568248 6253 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 Y_RNA.476-201ENST00000384347 108 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 Y_RNA.556-201ENST00000384677 113 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 RN7SKP267-201ENST00000410381 285 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 RN7SKP58-201ENST00000411010 305 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 RNU6-847P-201ENST00000411115 108 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 HMGB1P12-201ENST00000438594 598 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 NOTCH2P1-201ENST00000443481 624 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AL356981.1-201ENST00000454879 684 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 U8.20-201ENST00000459445 131 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 RN7SL517P-201ENST00000462240 305 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 RN7SL41P-201ENST00000476144 297 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC090686.1-201ENST00000481577 749 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC012158.1-204ENST00000483430 465 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 SNORA31.3-201ENST00000516029 96 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC008694.2-201ENST00000517591 306 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AP001781.1-201ENST00000530977 207 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AL020997.2-201ENST00000602607 184 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC002044.1-201ENST00000606707 158 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC067931.1-201ENST00000624190 671 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AL450326.2-201ENST00000421913 1962 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 AC073136.1-201ENST00000449426 2884 ntBASIC5.76□□□□□ -1.49
USP17L3A6NCW0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.76□□□□□ -1.49
USP17L3A6NCW0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 AL121839.2-201ENST00000565058 6943 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 Y_RNA.153-201ENST00000363615 91 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 Y_RNA.389-201ENST00000383924 113 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 CECR9-201ENST00000453421 199 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 RPL21P41-201ENST00000459863 264 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 AC011276.1-201ENST00000469688 323 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 AC010618.1-201ENST00000469924 477 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 RNU6-475P-201ENST00000516073 104 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 RNA5SP384-201ENST00000516615 116 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 AC009812.2-201ENST00000517657 457 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 ERHP1-201ENST00000523006 310 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 MYL12BP1-201ENST00000569826 507 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 AC092447.9-201ENST00000603395 144 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 MIR6716-201ENST00000613413 80 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 AC068724.3-201ENST00000625906 87 ntBASIC5.75□□□□□ -1.49
USP17L3A6NCW0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
USP17L3A6NCW0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 AC112198.2-201ENST00000426589 6996 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 ADAM5-202ENST00000399789 1942 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 SNORA41-201ENST00000384675 132 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 RNU6-101P-201ENST00000410323 104 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 AC099799.1-201ENST00000439809 192 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 RNU6-709P-201ENST00000517257 104 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 AC105129.1-201ENST00000560250 297 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 AC023575.1-201ENST00000580510 358 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 BDH2P1-201ENST00000602288 736 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 AC104695.3-201ENST00000604052 296 ntBASIC5.74□□□□□ -1.49
USP17L3A6NCW0 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP17L3A6NCW0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms