Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR331-201ENST00000362302 94 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-600P-201ENST00000362524 99 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-845P-201ENST00000362578 103 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU1-20P-201ENST00000363314 162 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR3065-201ENST00000390137 79 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 CISD1P1-201ENST00000393907 327 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 HSPE1P8-201ENST00000406997 288 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU4-26P-201ENST00000410270 107 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL35AP12-201ENST00000425362 338 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 CALM2P2-201ENST00000428512 440 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 HMGB1P27-201ENST00000431429 603 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 KCTD9P3-201ENST00000434597 1169 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL590639.1-201ENST00000456484 337 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MTND1P11-201ENST00000456661 876 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL23AP11-201ENST00000475260 469 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RN7SL812P-201ENST00000493791 279 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MTCO3P9-201ENST00000506989 781 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 CCDC34P1-201ENST00000507441 517 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 SNORA31.3-201ENST00000516029 96 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-1314P-201ENST00000517139 104 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MYL12AP1-201ENST00000518490 515 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL137161.1-201ENST00000532231 390 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL118558.2-201ENST00000556294 238 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 IPO5P1-202ENST00000600039 287 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC093913.1-201ENST00000614178 329 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL359547.2-201ENST00000615810 418 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 uc_338.13-201ENST00000618243 179 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC009248.2-201ENST00000619826 254 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL357559.1-201ENST00000622228 274 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC005858.4-201ENST00000623191 700 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC140479.6-201ENST00000633535 357 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR6830-201ENST00000636015 70 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MTND5P42-201ENST00000637720 498 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 MTND4P29-201ENST00000503122 1372 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 SDAD1P2-201ENST00000441308 2028 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 SNORA70.2-201ENST00000364506 135 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNA5SP167-201ENST00000365461 116 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 Y_RNA.373-201ENST00000365600 103 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR607-201ENST00000385241 96 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 SNORD96B-201ENST00000386148 79 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-817P-201ENST00000391083 104 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNA5SP146-201ENST00000410743 123 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL591212.2-201ENST00000433923 257 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 TXNP1-201ENST00000441872 371 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC093019.1-201ENST00000443135 252 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-953P-201ENST00000459154 107 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC007547.1-201ENST00000462177 490 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC091885.1-201ENST00000506658 268 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 RN7SKP122-201ENST00000515923 296 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNA5SP446-201ENST00000515955 82 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 Y_RNA.665-201ENST00000516177 98 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 SNORA31.8-201ENST00000516327 108 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL7P20-201ENST00000520308 745 ntBASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.16□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms