Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 KRT8P20-201ENST00000423953 1409 ntBASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
RAB3IPQ96QF0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB3IPQ96QF0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 AL358852.1-201ENST00000623174 1268 ntBASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB3IPQ96QF0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 AC091799.1-201ENST00000422823 811 ntBASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 AC138907.5-202ENST00000569484 235 ntBASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 AC126544.1-201ENST00000580842 1059 ntBASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB3IPQ96QF0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 AC008406.3-201ENST00000620001 1374 ntBASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB3IPQ96QF0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms