Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 RBM17P1-201ENST00000453646 1190 ntBASIC15.91■□□□□ 0.14
GAFA1Q96PS6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.91■□□□□ 0.14
GAFA1Q96PS6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 FP475955.4-201ENST00000623131 1990 ntBASIC15.91■□□□□ 0.14
GAFA1Q96PS6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GAFA1Q96PS6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 AIRN-201ENST00000601203 4374 ntBASIC15.9■□□□□ 0.14
GAFA1Q96PS6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 AL355075.4-201ENST00000554988 638 ntBASIC15.9■□□□□ 0.14
GAFA1Q96PS6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 FEM1AP3-201ENST00000403722 1741 ntBASIC15.9■□□□□ 0.14
GAFA1Q96PS6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GAFA1Q96PS6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 UNC93B2-201ENST00000285383 730 ntBASIC15.89■□□□□ 0.13
GAFA1Q96PS6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 AC097488.1-201ENST00000507834 756 ntBASIC15.89■□□□□ 0.13
GAFA1Q96PS6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 CKBP1-201ENST00000565489 1086 ntBASIC15.89■□□□□ 0.13
GAFA1Q96PS6 SLC25A1P4-201ENST00000567977 778 ntBASIC15.89■□□□□ 0.13
GAFA1Q96PS6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms