Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
VTI1AQ96AJ9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
VTI1AQ96AJ9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
VTI1AQ96AJ9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.58■■□□□ 1.04
VTI1AQ96AJ9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VTI1AQ96AJ9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
VTI1AQ96AJ9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 AC112907.3-201ENST00000577781 2400 ntBASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 AL391422.3-201ENST00000603791 2761 ntBASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.56■■□□□ 1.04
VTI1AQ96AJ9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 AP003041.3-201ENST00000527151 707 ntBASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTI1AQ96AJ9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 HCG4P8-203ENST00000443049 980 ntBASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 CA15P1-201ENST00000481698 905 ntBASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTI1AQ96AJ9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 PRSS44-201ENST00000515154 1146 ntBASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms