Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 KRT18P58-201ENST00000527480 1120 ntBASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 NSUN5P1-202ENST00000421140 1535 ntBASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 NSUN5P2-203ENST00000457352 1529 ntBASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 AC022898.2-201ENST00000616822 1312 ntBASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 AC104417.2-201ENST00000562989 1793 ntBASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
ALMS1Q8TCU4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 AC104819.1-201ENST00000504587 486 ntBASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 MIR564-202ENST00000385049 94 ntBASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 AC106730.1-201ENST00000566722 1090 ntBASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 AP001005.1-201ENST00000571755 1248 ntBASIC12.88□□□□□ -0.35
ALMS1Q8TCU4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 AC099336.1-202ENST00000602961 463 ntBASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 FBXW4P1-201ENST00000426721 2239 ntBASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.87□□□□□ -0.35
ALMS1Q8TCU4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms