Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 PCDHAC2-203ENST00000615316 3011 ntBASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 MRPL3P1-201ENST00000400109 1033 ntBASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 LINC00167-201ENST00000530583 1419 ntBASIC11.8□□□□□ -0.52
VPS13BQ7Z7G8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 TPSP2-201ENST00000561760 610 ntBASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 IL9RP2-201ENST00000423948 1312 ntBASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 AC009237.14-201ENST00000609975 1594 ntBASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC11.79□□□□□ -0.52
VPS13BQ7Z7G8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 AC004870.1-201ENST00000315132 882 ntBASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 AL160286.2-201ENST00000567150 934 ntBASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 AC011498.5-201ENST00000592027 486 ntBASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 AC091304.2-201ENST00000564639 760 ntBASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 AP005901.3-202ENST00000581653 237 ntBASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 AC099778.1-201ENST00000568593 1911 ntBASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms