Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RNF213Q63HN8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RNF213Q63HN8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 ALG1L5P-201ENST00000482043 771 ntBASIC10.22□□□□□ -0.77
RNF213Q63HN8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 AC145285.3-201ENST00000564603 959 ntBASIC10.22□□□□□ -0.77
RNF213Q63HN8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RNF213Q63HN8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RNF213Q63HN8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RNF213Q63HN8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RNF213Q63HN8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RNF213Q63HN8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 AC233702.3-201ENST00000578656 1387 ntBASIC10.22□□□□□ -0.77
RNF213Q63HN8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC10.22□□□□□ -0.77
RNF213Q63HN8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC10.21□□□□□ -0.77
RNF213Q63HN8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 RNA5SP415-201ENST00000517246 115 ntBASIC10.21□□□□□ -0.77
RNF213Q63HN8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC10.21□□□□□ -0.77
RNF213Q63HN8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC10.21□□□□□ -0.77
RNF213Q63HN8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC10.21□□□□□ -0.77
RNF213Q63HN8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC10.21□□□□□ -0.77
RNF213Q63HN8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC10.21□□□□□ -0.77
RNF213Q63HN8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC10.21□□□□□ -0.77
RNF213Q63HN8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC10.21□□□□□ -0.77
RNF213Q63HN8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 AL121603.2-201ENST00000557373 2117 ntBASIC10.21□□□□□ -0.77
RNF213Q63HN8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RNF213Q63HN8 AC004832.2-201ENST00000426397 482 ntBASIC10.21□□□□□ -0.78
RNF213Q63HN8 SLC25A6P5-201ENST00000435663 894 ntBASIC10.21□□□□□ -0.78
RNF213Q63HN8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 AP002472.1-201ENST00000577490 586 ntBASIC10.21□□□□□ -0.78
RNF213Q63HN8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 IGHV3-41-201ENST00000613121 348 ntBASIC10.21□□□□□ -0.78
RNF213Q63HN8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC10.21□□□□□ -0.78
RNF213Q63HN8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RNF213Q63HN8 OR8S1-201ENST00000310194 1080 ntBASIC10.2□□□□□ -0.78
RNF213Q63HN8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
RNF213Q63HN8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RNF213Q63HN8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RNF213Q63HN8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
RNF213Q63HN8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RNF213Q63HN8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 AC004945.1-201ENST00000416738 983 ntBASIC10.2□□□□□ -0.78
RNF213Q63HN8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 MTDHP5-201ENST00000598980 586 ntBASIC10.2□□□□□ -0.78
RNF213Q63HN8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
RNF213Q63HN8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC10.2□□□□□ -0.78
RNF213Q63HN8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms