Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
HMGXB3Q12766 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
HMGXB3Q12766 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC33.71■■■□□ 2.99
HMGXB3Q12766 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC33.71■■■□□ 2.99
HMGXB3Q12766 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
HMGXB3Q12766 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC33.71■■■□□ 2.99
HMGXB3Q12766 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
HMGXB3Q12766 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC33.71■■■□□ 2.99
HMGXB3Q12766 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC33.7■■■□□ 2.99
HMGXB3Q12766 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
HMGXB3Q12766 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
HMGXB3Q12766 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
HMGXB3Q12766 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
HMGXB3Q12766 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC33.7■■■□□ 2.99
HMGXB3Q12766 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
HMGXB3Q12766 AP005901.3-202ENST00000581653 237 ntBASIC33.7■■■□□ 2.99
HMGXB3Q12766 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC33.7■■■□□ 2.99
HMGXB3Q12766 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC33.7■■■□□ 2.99
HMGXB3Q12766 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC33.7■■■□□ 2.99
HMGXB3Q12766 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC33.7■■■□□ 2.99
HMGXB3Q12766 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
HMGXB3Q12766 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
HMGXB3Q12766 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC33.69■■■□□ 2.98
HMGXB3Q12766 ABR-217ENST00000572441 563 ntTSL 4 BASIC33.69■■■□□ 2.98
HMGXB3Q12766 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC33.69■■■□□ 2.98
HMGXB3Q12766 GPR32P1-201ENST00000601788 811 ntBASIC33.69■■■□□ 2.98
HMGXB3Q12766 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC33.69■■■□□ 2.98
HMGXB3Q12766 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC33.69■■■□□ 2.98
HMGXB3Q12766 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC33.69■■■□□ 2.98
HMGXB3Q12766 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC33.69■■■□□ 2.98
HMGXB3Q12766 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC33.69■■■□□ 2.98
HMGXB3Q12766 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC33.69■■■□□ 2.98
HMGXB3Q12766 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
HMGXB3Q12766 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC33.68■■■□□ 2.98
HMGXB3Q12766 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC33.68■■■□□ 2.98
HMGXB3Q12766 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC33.68■■■□□ 2.98
HMGXB3Q12766 FAM220CP-201ENST00000395253 831 ntBASIC33.68■■■□□ 2.98
HMGXB3Q12766 LSM5-204ENST00000409909 740 ntTSL 2 BASIC33.68■■■□□ 2.98
HMGXB3Q12766 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC33.68■■■□□ 2.98
HMGXB3Q12766 AP005212.1-201ENST00000581547 1997 ntBASIC33.67■■■□□ 2.98
HMGXB3Q12766 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC33.67■■■□□ 2.98
HMGXB3Q12766 AC243591.1-201ENST00000452967 1364 ntBASIC33.67■■■□□ 2.98
HMGXB3Q12766 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC33.67■■■□□ 2.98
HMGXB3Q12766 KRT18P67-201ENST00000432816 1264 ntBASIC33.67■■■□□ 2.98
HMGXB3Q12766 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC33.67■■■□□ 2.98
HMGXB3Q12766 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC33.67■■■□□ 2.98
HMGXB3Q12766 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC33.67■■■□□ 2.98
HMGXB3Q12766 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC33.67■■■□□ 2.98
HMGXB3Q12766 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
HMGXB3Q12766 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
HMGXB3Q12766 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
HMGXB3Q12766 EMD-201ENST00000369835 966 ntTSL 3 BASIC33.66■■■□□ 2.98
HMGXB3Q12766 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC33.66■■■□□ 2.98
HMGXB3Q12766 AC018712.1-201ENST00000455767 687 ntBASIC33.66■■■□□ 2.98
HMGXB3Q12766 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC33.66■■■□□ 2.98
HMGXB3Q12766 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC33.66■■■□□ 2.98
HMGXB3Q12766 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC33.66■■■□□ 2.98
HMGXB3Q12766 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC33.66■■■□□ 2.98
HMGXB3Q12766 NSUN5P1-202ENST00000421140 1535 ntBASIC33.66■■■□□ 2.98
HMGXB3Q12766 NSUN5P2-203ENST00000457352 1529 ntBASIC33.66■■■□□ 2.98
HMGXB3Q12766 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
HMGXB3Q12766 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
HMGXB3Q12766 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
HMGXB3Q12766 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC33.65■■■□□ 2.98
HMGXB3Q12766 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC33.65■■■□□ 2.98
HMGXB3Q12766 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC33.65■■■□□ 2.98
HMGXB3Q12766 HOXB1-202ENST00000577092 1414 ntBASIC33.65■■■□□ 2.98
HMGXB3Q12766 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC33.65■■■□□ 2.98
HMGXB3Q12766 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC33.65■■■□□ 2.98
HMGXB3Q12766 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC33.65■■■□□ 2.98
HMGXB3Q12766 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
HMGXB3Q12766 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC33.64■■■□□ 2.98
HMGXB3Q12766 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC33.64■■■□□ 2.98
HMGXB3Q12766 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC33.64■■■□□ 2.98
HMGXB3Q12766 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC33.64■■■□□ 2.98
HMGXB3Q12766 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
HMGXB3Q12766 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC33.64■■■□□ 2.98
HMGXB3Q12766 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC33.64■■■□□ 2.98
HMGXB3Q12766 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
HMGXB3Q12766 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC33.64■■■□□ 2.98
HMGXB3Q12766 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
HMGXB3Q12766 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC33.63■■■□□ 2.97
HMGXB3Q12766 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
HMGXB3Q12766 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC33.63■■■□□ 2.97
HMGXB3Q12766 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC33.63■■■□□ 2.97
HMGXB3Q12766 AC010240.3-201ENST00000607688 395 ntBASIC33.63■■■□□ 2.97
HMGXB3Q12766 CCNC-219ENST00000627680 896 ntTSL 5 BASIC33.63■■■□□ 2.97
HMGXB3Q12766 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
HMGXB3Q12766 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
HMGXB3Q12766 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
HMGXB3Q12766 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC33.63■■■□□ 2.97
HMGXB3Q12766 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC33.63■■■□□ 2.97
HMGXB3Q12766 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC33.63■■■□□ 2.97
HMGXB3Q12766 GAS2L1P1-201ENST00000420145 1480 ntBASIC33.63■■■□□ 2.97
HMGXB3Q12766 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
HMGXB3Q12766 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
HMGXB3Q12766 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC33.63■■■□□ 2.97
HMGXB3Q12766 KRT18P23-201ENST00000435622 1283 ntBASIC33.63■■■□□ 2.97
HMGXB3Q12766 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC33.63■■■□□ 2.97
HMGXB3Q12766 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC33.63■■■□□ 2.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms