Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR1H2P55055 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
NR1H2P55055 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR1H2P55055 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR1H2P55055 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NR1H2P55055 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR1H2P55055 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR1H2P55055 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NR1H2P55055 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
NR1H2P55055 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NR1H2P55055 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 AL031598.1-201ENST00000561511 1773 ntBASIC18.07■□□□□ 0.48
NR1H2P55055 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.07■□□□□ 0.48
NR1H2P55055 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
NR1H2P55055 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.07■□□□□ 0.48
NR1H2P55055 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.07■□□□□ 0.48
NR1H2P55055 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NR1H2P55055 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 CDV3P1-201ENST00000471403 739 ntBASIC18.07■□□□□ 0.48
NR1H2P55055 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.07■□□□□ 0.48
NR1H2P55055 RNA5SP413-201ENST00000516373 109 ntBASIC18.07■□□□□ 0.48
NR1H2P55055 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.07■□□□□ 0.48
NR1H2P55055 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.07■□□□□ 0.48
NR1H2P55055 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NR1H2P55055 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.07■□□□□ 0.48
NR1H2P55055 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR1H2P55055 AC010980.2-201ENST00000587099 1412 ntBASIC18.06■□□□□ 0.48
NR1H2P55055 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.06■□□□□ 0.48
NR1H2P55055 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.06■□□□□ 0.48
NR1H2P55055 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.06■□□□□ 0.48
NR1H2P55055 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NR1H2P55055 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
NR1H2P55055 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.06■□□□□ 0.48
NR1H2P55055 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.06■□□□□ 0.48
NR1H2P55055 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
NR1H2P55055 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NR1H2P55055 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.06■□□□□ 0.48
NR1H2P55055 AC106820.2-201ENST00000563775 3264 ntBASIC18.06■□□□□ 0.48
NR1H2P55055 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR1H2P55055 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.05■□□□□ 0.48
NR1H2P55055 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NR1H2P55055 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NR1H2P55055 AC099398.1-201ENST00000567919 2776 ntBASIC18.05■□□□□ 0.48
NR1H2P55055 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
NR1H2P55055 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.05■□□□□ 0.48
NR1H2P55055 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.05■□□□□ 0.48
NR1H2P55055 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.05■□□□□ 0.48
NR1H2P55055 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
NR1H2P55055 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.05■□□□□ 0.48
NR1H2P55055 FAM21FP-204ENST00000608637 956 ntBASIC18.05■□□□□ 0.48
NR1H2P55055 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.05■□□□□ 0.48
NR1H2P55055 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.05■□□□□ 0.48
NR1H2P55055 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.05■□□□□ 0.48
NR1H2P55055 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NR1H2P55055 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
NR1H2P55055 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NR1H2P55055 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.04■□□□□ 0.48
NR1H2P55055 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NR1H2P55055 Z98044.1-201ENST00000632503 1764 ntBASIC18.04■□□□□ 0.48
NR1H2P55055 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.04■□□□□ 0.48
NR1H2P55055 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms