Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.58■■□□□ 1.37
PDE6BP35913 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDE6BP35913 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PDE6BP35913 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.58■■□□□ 1.37
PDE6BP35913 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDE6BP35913 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDE6BP35913 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
PDE6BP35913 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
PDE6BP35913 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDE6BP35913 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.57■■□□□ 1.36
PDE6BP35913 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDE6BP35913 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDE6BP35913 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDE6BP35913 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDE6BP35913 MIR662-201ENST00000384847 95 ntBASIC23.57■■□□□ 1.36
PDE6BP35913 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDE6BP35913 TSPY22P-201ENST00000427496 604 ntBASIC23.57■■□□□ 1.36
PDE6BP35913 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.57■■□□□ 1.36
PDE6BP35913 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PDE6BP35913 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDE6BP35913 MIR3180-5-201ENST00000583743 153 ntBASIC23.57■■□□□ 1.36
PDE6BP35913 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.57■■□□□ 1.36
PDE6BP35913 AL121772.3-201ENST00000610840 674 ntBASIC23.57■■□□□ 1.36
PDE6BP35913 AL031008.1-201ENST00000619963 541 ntBASIC23.57■■□□□ 1.36
PDE6BP35913 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDE6BP35913 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
PDE6BP35913 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.57■■□□□ 1.36
PDE6BP35913 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDE6BP35913 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PDE6BP35913 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PDE6BP35913 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.56■■□□□ 1.36
PDE6BP35913 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PDE6BP35913 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDE6BP35913 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.56■■□□□ 1.36
PDE6BP35913 DRAXINP1-201ENST00000437611 948 ntBASIC23.56■■□□□ 1.36
PDE6BP35913 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PDE6BP35913 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PDE6BP35913 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.56■■□□□ 1.36
PDE6BP35913 AC091304.2-201ENST00000564639 760 ntBASIC23.56■■□□□ 1.36
PDE6BP35913 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
PDE6BP35913 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.56■■□□□ 1.36
PDE6BP35913 AC104692.2-201ENST00000603054 253 ntBASIC23.56■■□□□ 1.36
PDE6BP35913 AL732292.2-201ENST00000609649 430 ntBASIC23.56■■□□□ 1.36
PDE6BP35913 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDE6BP35913 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDE6BP35913 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDE6BP35913 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDE6BP35913 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.55■■□□□ 1.36
PDE6BP35913 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDE6BP35913 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PDE6BP35913 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE6BP35913 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.55■■□□□ 1.36
PDE6BP35913 MCCD1P1-208ENST00000445732 328 ntBASIC23.55■■□□□ 1.36
PDE6BP35913 AL160237.2-201ENST00000556165 472 ntBASIC23.55■■□□□ 1.36
PDE6BP35913 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.55■■□□□ 1.36
PDE6BP35913 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.55■■□□□ 1.36
PDE6BP35913 AL136038.4-201ENST00000603606 1261 ntBASIC23.55■■□□□ 1.36
PDE6BP35913 AL157888.1-201ENST00000631930 593 ntBASIC23.55■■□□□ 1.36
PDE6BP35913 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE6BP35913 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE6BP35913 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDE6BP35913 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDE6BP35913 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.55■■□□□ 1.36
PDE6BP35913 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE6BP35913 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDE6BP35913 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PDE6BP35913 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.54■■□□□ 1.36
PDE6BP35913 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE6BP35913 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.54■■□□□ 1.36
PDE6BP35913 TPSP2-201ENST00000561760 610 ntBASIC23.54■■□□□ 1.36
PDE6BP35913 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.54■■□□□ 1.36
PDE6BP35913 LINC01711-201ENST00000598340 967 ntBASIC23.54■■□□□ 1.36
PDE6BP35913 GPALPP1-207ENST00000611650 899 ntBASIC23.54■■□□□ 1.36
PDE6BP35913 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.54■■□□□ 1.36
PDE6BP35913 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.54■■□□□ 1.36
PDE6BP35913 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.54■■□□□ 1.36
PDE6BP35913 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDE6BP35913 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PDE6BP35913 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PDE6BP35913 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.54■■□□□ 1.36
PDE6BP35913 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
PDE6BP35913 AL391807.1-203ENST00000604392 2365 ntBASIC23.54■■□□□ 1.36
PDE6BP35913 ZNF815P-204ENST00000434898 1737 ntBASIC23.53■■□□□ 1.36
PDE6BP35913 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDE6BP35913 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.53■■□□□ 1.36
PDE6BP35913 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDE6BP35913 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.53■■□□□ 1.36
PDE6BP35913 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDE6BP35913 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDE6BP35913 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.53■■□□□ 1.36
PDE6BP35913 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
PDE6BP35913 AP000867.3-201ENST00000524675 377 ntBASIC23.53■■□□□ 1.36
PDE6BP35913 AC112497.1-201ENST00000624824 639 ntBASIC23.53■■□□□ 1.36
PDE6BP35913 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.53■■□□□ 1.36
PDE6BP35913 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PDE6BP35913 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDE6BP35913 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.53■■□□□ 1.36
PDE6BP35913 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PDE6BP35913 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PDE6BP35913 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms