Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCL4P13236 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.06■□□□□ 0.48
CCL4P13236 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL4P13236 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.06■□□□□ 0.48
CCL4P13236 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.06■□□□□ 0.48
CCL4P13236 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.06■□□□□ 0.48
CCL4P13236 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.06■□□□□ 0.48
CCL4P13236 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL4P13236 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL4P13236 GPAT2P1-201ENST00000444924 1672 ntBASIC18.06■□□□□ 0.48
CCL4P13236 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.06■□□□□ 0.48
CCL4P13236 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.06■□□□□ 0.48
CCL4P13236 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.05■□□□□ 0.48
CCL4P13236 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.05■□□□□ 0.48
CCL4P13236 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 TSPY21P-201ENST00000433481 731 ntBASIC18.05■□□□□ 0.48
CCL4P13236 SPDYE13P-201ENST00000445314 798 ntBASIC18.05■□□□□ 0.48
CCL4P13236 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.05■□□□□ 0.48
CCL4P13236 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.05■□□□□ 0.48
CCL4P13236 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.05■□□□□ 0.48
CCL4P13236 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.05■□□□□ 0.48
CCL4P13236 CLEC4GP1-201ENST00000596555 870 ntBASIC18.05■□□□□ 0.48
CCL4P13236 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
CCL4P13236 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCL4P13236 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.04■□□□□ 0.48
CCL4P13236 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCL4P13236 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.04■□□□□ 0.48
CCL4P13236 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.04■□□□□ 0.48
CCL4P13236 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.04■□□□□ 0.48
CCL4P13236 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CCL4P13236 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.04■□□□□ 0.48
CCL4P13236 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.04■□□□□ 0.48
CCL4P13236 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.04■□□□□ 0.48
CCL4P13236 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.04■□□□□ 0.48
CCL4P13236 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCL4P13236 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.03■□□□□ 0.48
CCL4P13236 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.03■□□□□ 0.48
CCL4P13236 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.03■□□□□ 0.48
CCL4P13236 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.03■□□□□ 0.48
CCL4P13236 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.03■□□□□ 0.48
CCL4P13236 AC092597.1-201ENST00000487352 616 ntBASIC18.03■□□□□ 0.48
CCL4P13236 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCL4P13236 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.03■□□□□ 0.48
CCL4P13236 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.03■□□□□ 0.48
CCL4P13236 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCL4P13236 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.03■□□□□ 0.48
CCL4P13236 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCL4P13236 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CCL4P13236 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.02■□□□□ 0.48
CCL4P13236 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCL4P13236 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCL4P13236 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCL4P13236 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCL4P13236 HBZP1-201ENST00000354915 429 ntBASIC18.02■□□□□ 0.48
CCL4P13236 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCL4P13236 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCL4P13236 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms