Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.12■□□□□ 0.97
CD4P01730 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.12■□□□□ 0.97
CD4P01730 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.12■□□□□ 0.97
CD4P01730 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.12■□□□□ 0.97
CD4P01730 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.12■□□□□ 0.97
CD4P01730 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.12■□□□□ 0.97
CD4P01730 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.12■□□□□ 0.97
CD4P01730 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.12■□□□□ 0.97
CD4P01730 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.12■□□□□ 0.97
CD4P01730 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CD4P01730 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.12■□□□□ 0.97
CD4P01730 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CD4P01730 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.11■□□□□ 0.97
CD4P01730 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD4P01730 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.11■□□□□ 0.97
CD4P01730 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.11■□□□□ 0.97
CD4P01730 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD4P01730 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.11■□□□□ 0.97
CD4P01730 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.11■□□□□ 0.97
CD4P01730 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.11■□□□□ 0.97
CD4P01730 CR769767.2-201ENST00000622735 460 ntBASIC21.11■□□□□ 0.97
CD4P01730 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CD4P01730 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD4P01730 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.11■□□□□ 0.97
CD4P01730 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD4P01730 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD4P01730 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.11■□□□□ 0.97
CD4P01730 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.11■□□□□ 0.97
CD4P01730 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.11■□□□□ 0.97
CD4P01730 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CD4P01730 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CD4P01730 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD4P01730 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CD4P01730 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CD4P01730 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD4P01730 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD4P01730 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD4P01730 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.1■□□□□ 0.97
CD4P01730 AL645929.1-201ENST00000420084 975 ntBASIC21.1■□□□□ 0.97
CD4P01730 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CD4P01730 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.1■□□□□ 0.97
CD4P01730 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.1■□□□□ 0.97
CD4P01730 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.1■□□□□ 0.97
CD4P01730 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CD4P01730 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.1■□□□□ 0.97
CD4P01730 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CD4P01730 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.1■□□□□ 0.97
CD4P01730 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD4P01730 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD4P01730 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD4P01730 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.1■□□□□ 0.97
CD4P01730 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD4P01730 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CD4P01730 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CD4P01730 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
CD4P01730 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.09■□□□□ 0.97
CD4P01730 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.09■□□□□ 0.97
CD4P01730 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.09■□□□□ 0.97
CD4P01730 FDX1P1-201ENST00000449115 551 ntBASIC21.09■□□□□ 0.97
CD4P01730 AC092597.1-201ENST00000487352 616 ntBASIC21.09■□□□□ 0.97
CD4P01730 MIR3652-201ENST00000579335 131 ntBASIC21.09■□□□□ 0.97
CD4P01730 RN7SL510P-201ENST00000581311 263 ntBASIC21.09■□□□□ 0.97
CD4P01730 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.09■□□□□ 0.97
CD4P01730 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD4P01730 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.08■□□□□ 0.97
CD4P01730 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD4P01730 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CD4P01730 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD4P01730 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CD4P01730 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.08■□□□□ 0.97
CD4P01730 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.08■□□□□ 0.97
CD4P01730 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.08■□□□□ 0.97
CD4P01730 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD4P01730 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.08■□□□□ 0.97
CD4P01730 RASA4DP-201ENST00000460726 1199 ntBASIC21.08■□□□□ 0.97
CD4P01730 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CD4P01730 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.08■□□□□ 0.97
CD4P01730 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms