Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 AC012306.2-201ENST00000609350 630 ntBASIC18.37■□□□□ 0.53
PRICKLE3O43900 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.37■□□□□ 0.53
PRICKLE3O43900 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 FEM1AP3-201ENST00000403722 1741 ntBASIC18.37■□□□□ 0.53
PRICKLE3O43900 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRICKLE3O43900 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRICKLE3O43900 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 IRX1P1-201ENST00000438849 1838 ntBASIC18.36■□□□□ 0.53
PRICKLE3O43900 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRICKLE3O43900 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRICKLE3O43900 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.35■□□□□ 0.53
PRICKLE3O43900 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 CA15P1-201ENST00000481698 905 ntBASIC18.35■□□□□ 0.53
PRICKLE3O43900 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 AL023803.3-201ENST00000615559 522 ntBASIC18.35■□□□□ 0.53
PRICKLE3O43900 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRICKLE3O43900 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
PRICKLE3O43900 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 FP475955.4-201ENST00000623131 1990 ntBASIC18.34■□□□□ 0.53
PRICKLE3O43900 TSPY14P-201ENST00000303979 915 ntBASIC18.34■□□□□ 0.53
PRICKLE3O43900 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 ECEL1P3-201ENST00000427961 737 ntBASIC18.34■□□□□ 0.53
PRICKLE3O43900 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.34■□□□□ 0.53
PRICKLE3O43900 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRICKLE3O43900 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PRICKLE3O43900 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRICKLE3O43900 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms