Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHD2O14647 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHD2O14647 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHD2O14647 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC26.64■■□□□ 1.85
CHD2O14647 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC26.64■■□□□ 1.85
CHD2O14647 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CHD2O14647 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CHD2O14647 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CHD2O14647 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CHD2O14647 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
CHD2O14647 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC26.63■■□□□ 1.85
CHD2O14647 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC26.63■■□□□ 1.85
CHD2O14647 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
CHD2O14647 PPIE-208ENST00000470213 927 ntTSL 3 BASIC26.63■■□□□ 1.85
CHD2O14647 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
CHD2O14647 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC26.63■■□□□ 1.85
CHD2O14647 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC26.63■■□□□ 1.85
CHD2O14647 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
CHD2O14647 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC26.63■■□□□ 1.85
CHD2O14647 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CHD2O14647 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHD2O14647 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD2O14647 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC26.62■■□□□ 1.85
CHD2O14647 GPR32P1-201ENST00000601788 811 ntBASIC26.62■■□□□ 1.85
CHD2O14647 AL390719.2-201ENST00000606993 987 ntBASIC26.62■■□□□ 1.85
CHD2O14647 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CHD2O14647 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD2O14647 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
CHD2O14647 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD2O14647 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CHD2O14647 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CHD2O14647 MCCD1P1-208ENST00000445732 328 ntBASIC26.62■■□□□ 1.85
CHD2O14647 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC26.62■■□□□ 1.85
CHD2O14647 AP001005.1-201ENST00000571755 1248 ntBASIC26.62■■□□□ 1.85
CHD2O14647 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC26.62■■□□□ 1.85
CHD2O14647 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHD2O14647 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC26.62■■□□□ 1.85
CHD2O14647 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.62■■□□□ 1.85
CHD2O14647 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CHD2O14647 GAS2L1P1-201ENST00000420145 1480 ntBASIC26.61■■□□□ 1.85
CHD2O14647 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD2O14647 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD2O14647 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD2O14647 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD2O14647 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC26.61■■□□□ 1.85
CHD2O14647 GRAMD4P1-201ENST00000435181 1110 ntBASIC26.61■■□□□ 1.85
CHD2O14647 SLC25A1P1-201ENST00000528351 927 ntBASIC26.61■■□□□ 1.85
CHD2O14647 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
CHD2O14647 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC26.61■■□□□ 1.85
CHD2O14647 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CHD2O14647 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC26.61■■□□□ 1.85
CHD2O14647 AC117500.6-201ENST00000624871 588 ntBASIC26.61■■□□□ 1.85
CHD2O14647 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CHD2O14647 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC26.61■■□□□ 1.85
CHD2O14647 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC26.61■■□□□ 1.85
CHD2O14647 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC26.61■■□□□ 1.85
CHD2O14647 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD2O14647 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CHD2O14647 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.61■■□□□ 1.85
CHD2O14647 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD2O14647 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CHD2O14647 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHD2O14647 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
CHD2O14647 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC26.6■■□□□ 1.85
CHD2O14647 AF228730.7-201ENST00000641842 219 ntBASIC26.6■■□□□ 1.85
CHD2O14647 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC26.6■■□□□ 1.85
CHD2O14647 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC26.6■■□□□ 1.85
CHD2O14647 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CHD2O14647 ZNF815P-204ENST00000434898 1737 ntBASIC26.6■■□□□ 1.85
CHD2O14647 AC079834.2-201ENST00000609776 1949 ntBASIC26.6■■□□□ 1.85
CHD2O14647 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CHD2O14647 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CHD2O14647 KRT18P13-201ENST00000400056 1290 ntBASIC26.6■■□□□ 1.85
CHD2O14647 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC26.6■■□□□ 1.85
CHD2O14647 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
CHD2O14647 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC26.6■■□□□ 1.85
CHD2O14647 AL773604.1-201ENST00000617417 272 ntBASIC26.6■■□□□ 1.85
CHD2O14647 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC26.6■■□□□ 1.85
CHD2O14647 Z83836.1-201ENST00000624605 1642 ntBASIC26.6■■□□□ 1.85
CHD2O14647 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CHD2O14647 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CHD2O14647 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC26.59■■□□□ 1.85
CHD2O14647 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 IGHV3-47-201ENST00000425060 335 ntBASIC26.59■■□□□ 1.85
CHD2O14647 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms