Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC32.76■■■□□ 2.84
CUX2O14529 CD37-204ENST00000535669 1674 ntTSL 2 BASIC32.76■■■□□ 2.84
CUX2O14529 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CUX2O14529 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC32.76■■■□□ 2.83
CUX2O14529 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CUX2O14529 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
CUX2O14529 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CUX2O14529 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CUX2O14529 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC32.75■■■□□ 2.83
CUX2O14529 AP006288.1-201ENST00000446065 395 ntBASIC32.75■■■□□ 2.83
CUX2O14529 SCARNA2-201ENST00000458748 420 ntBASIC32.75■■■□□ 2.83
CUX2O14529 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC32.75■■■□□ 2.83
CUX2O14529 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC32.75■■■□□ 2.83
CUX2O14529 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC32.75■■■□□ 2.83
CUX2O14529 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CUX2O14529 AL356488.2-201ENST00000602755 427 ntBASIC32.75■■■□□ 2.83
CUX2O14529 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CUX2O14529 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CUX2O14529 UBC-206ENST00000538617 1303 ntTSL 5 BASIC32.75■■■□□ 2.83
CUX2O14529 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC32.75■■■□□ 2.83
CUX2O14529 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
CUX2O14529 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
CUX2O14529 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 NUS1P2-201ENST00000417358 873 ntBASIC32.74■■■□□ 2.83
CUX2O14529 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
CUX2O14529 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC32.74■■■□□ 2.83
CUX2O14529 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC32.74■■■□□ 2.83
CUX2O14529 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC32.74■■■□□ 2.83
CUX2O14529 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC32.74■■■□□ 2.83
CUX2O14529 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC32.74■■■□□ 2.83
CUX2O14529 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
CUX2O14529 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
CUX2O14529 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 AC112482.1-201ENST00000492080 688 ntBASIC32.74■■■□□ 2.83
CUX2O14529 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
CUX2O14529 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC32.74■■■□□ 2.83
CUX2O14529 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC32.74■■■□□ 2.83
CUX2O14529 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC32.74■■■□□ 2.83
CUX2O14529 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC32.74■■■□□ 2.83
CUX2O14529 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CUX2O14529 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC32.73■■■□□ 2.83
CUX2O14529 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CUX2O14529 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CUX2O14529 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC32.73■■■□□ 2.83
CUX2O14529 FP700111.2-201ENST00000619190 1892 ntBASIC32.73■■■□□ 2.83
CUX2O14529 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC32.73■■■□□ 2.83
CUX2O14529 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
CUX2O14529 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CUX2O14529 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CUX2O14529 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC32.73■■■□□ 2.83
CUX2O14529 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC32.73■■■□□ 2.83
CUX2O14529 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC32.73■■■□□ 2.83
CUX2O14529 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
CUX2O14529 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC32.73■■■□□ 2.83
CUX2O14529 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC32.73■■■□□ 2.83
CUX2O14529 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC32.73■■■□□ 2.83
CUX2O14529 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
CUX2O14529 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CUX2O14529 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CUX2O14529 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CUX2O14529 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
CUX2O14529 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC32.72■■■□□ 2.83
CUX2O14529 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC32.72■■■□□ 2.83
CUX2O14529 AL591424.1-201ENST00000442569 1213 ntBASIC32.72■■■□□ 2.83
CUX2O14529 LHX6-205ENST00000464484 666 ntTSL 2 BASIC32.72■■■□□ 2.83
CUX2O14529 PRR29-209ENST00000582540 967 ntTSL 2 BASIC32.72■■■□□ 2.83
CUX2O14529 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
CUX2O14529 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC32.71■■■□□ 2.83
CUX2O14529 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CUX2O14529 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC32.71■■■□□ 2.83
CUX2O14529 CDV3-207ENST00000508481 661 ntTSL 3 BASIC32.71■■■□□ 2.83
CUX2O14529 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CUX2O14529 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC32.71■■■□□ 2.83
CUX2O14529 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC32.71■■■□□ 2.83
CUX2O14529 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC32.71■■■□□ 2.83
CUX2O14529 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CUX2O14529 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CUX2O14529 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CUX2O14529 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC32.7■■■□□ 2.83
CUX2O14529 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CUX2O14529 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CUX2O14529 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CUX2O14529 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC32.7■■■□□ 2.83
CUX2O14529 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CUX2O14529 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC32.7■■■□□ 2.83
CUX2O14529 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CUX2O14529 MIR3687-2-201ENST00000577708 61 ntBASIC32.7■■■□□ 2.83
CUX2O14529 MIR3687-1-201ENST00000614492 61 ntBASIC32.7■■■□□ 2.83
CUX2O14529 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC32.7■■■□□ 2.83
CUX2O14529 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CUX2O14529 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms