Protein–RNA interactions for Protein: Q9R0P9

Uchl1, Ubiquitin carboxyl-terminal hydrolase isozyme L1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl1Q9R0P9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl1Q9R0P9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl1Q9R0P9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl1Q9R0P9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl1Q9R0P9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl1Q9R0P9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uchl1Q9R0P9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl1Q9R0P9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl1Q9R0P9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl1Q9R0P9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl1Q9R0P9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uchl1Q9R0P9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uchl1Q9R0P9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uchl1Q9R0P9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Uchl1Q9R0P9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uchl1Q9R0P9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uchl1Q9R0P9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Uchl1Q9R0P9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uchl1Q9R0P9 Gm16148-201ENSMUST00000119653 893 ntBASIC20.46■□□□□ 0.87
Uchl1Q9R0P9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uchl1Q9R0P9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Uchl1Q9R0P9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl1Q9R0P9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl1Q9R0P9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl1Q9R0P9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.45■□□□□ 0.86
Uchl1Q9R0P9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl1Q9R0P9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uchl1Q9R0P9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Uchl1Q9R0P9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uchl1Q9R0P9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Uchl1Q9R0P9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uchl1Q9R0P9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uchl1Q9R0P9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uchl1Q9R0P9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Uchl1Q9R0P9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uchl1Q9R0P9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.41■□□□□ 0.86
Uchl1Q9R0P9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Uchl1Q9R0P9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uchl1Q9R0P9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Uchl1Q9R0P9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.4■□□□□ 0.86
Uchl1Q9R0P9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.4■□□□□ 0.86
Uchl1Q9R0P9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Uchl1Q9R0P9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.4■□□□□ 0.86
Uchl1Q9R0P9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Uchl1Q9R0P9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Uchl1Q9R0P9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uchl1Q9R0P9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Uchl1Q9R0P9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Uchl1Q9R0P9 Gm24804-201ENSMUST00000174982 85 ntBASIC20.38■□□□□ 0.85
Uchl1Q9R0P9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uchl1Q9R0P9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uchl1Q9R0P9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Uchl1Q9R0P9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Uchl1Q9R0P9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uchl1Q9R0P9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uchl1Q9R0P9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uchl1Q9R0P9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Uchl1Q9R0P9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uchl1Q9R0P9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uchl1Q9R0P9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Uchl1Q9R0P9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uchl1Q9R0P9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Uchl1Q9R0P9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uchl1Q9R0P9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Uchl1Q9R0P9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Uchl1Q9R0P9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Uchl1Q9R0P9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Uchl1Q9R0P9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uchl1Q9R0P9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uchl1Q9R0P9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Uchl1Q9R0P9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uchl1Q9R0P9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Uchl1Q9R0P9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uchl1Q9R0P9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uchl1Q9R0P9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uchl1Q9R0P9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uchl1Q9R0P9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uchl1Q9R0P9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uchl1Q9R0P9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uchl1Q9R0P9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Uchl1Q9R0P9 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.29■□□□□ 0.84
Uchl1Q9R0P9 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.29■□□□□ 0.84
Uchl1Q9R0P9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Uchl1Q9R0P9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uchl1Q9R0P9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uchl1Q9R0P9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Uchl1Q9R0P9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uchl1Q9R0P9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Uchl1Q9R0P9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.27■□□□□ 0.84
Uchl1Q9R0P9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Uchl1Q9R0P9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uchl1Q9R0P9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.26■□□□□ 0.83
Uchl1Q9R0P9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.26■□□□□ 0.83
Uchl1Q9R0P9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uchl1Q9R0P9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Uchl1Q9R0P9 Particl-201ENSMUST00000205370 1560 ntBASIC20.25■□□□□ 0.83
Uchl1Q9R0P9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Uchl1Q9R0P9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uchl1Q9R0P9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Uchl1Q9R0P9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms