Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nubp2Q9R061 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.43■□□□□ 0.86
Nubp2Q9R061 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nubp2Q9R061 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nubp2Q9R061 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nubp2Q9R061 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nubp2Q9R061 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nubp2Q9R061 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.38■□□□□ 0.85
Nubp2Q9R061 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.38■□□□□ 0.85
Nubp2Q9R061 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Nubp2Q9R061 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.38■□□□□ 0.85
Nubp2Q9R061 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nubp2Q9R061 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nubp2Q9R061 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nubp2Q9R061 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nubp2Q9R061 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nubp2Q9R061 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nubp2Q9R061 Gm30023-201ENSMUST00000197970 889 ntBASIC20.36■□□□□ 0.85
Nubp2Q9R061 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.36■□□□□ 0.85
Nubp2Q9R061 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nubp2Q9R061 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nubp2Q9R061 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nubp2Q9R061 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nubp2Q9R061 Gm11599-201ENSMUST00000118720 878 ntBASIC20.35■□□□□ 0.85
Nubp2Q9R061 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nubp2Q9R061 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nubp2Q9R061 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nubp2Q9R061 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nubp2Q9R061 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nubp2Q9R061 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nubp2Q9R061 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nubp2Q9R061 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.33■□□□□ 0.85
Nubp2Q9R061 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nubp2Q9R061 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nubp2Q9R061 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nubp2Q9R061 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nubp2Q9R061 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nubp2Q9R061 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nubp2Q9R061 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nubp2Q9R061 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nubp2Q9R061 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
Nubp2Q9R061 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nubp2Q9R061 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Nubp2Q9R061 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nubp2Q9R061 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nubp2Q9R061 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nubp2Q9R061 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nubp2Q9R061 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.29■□□□□ 0.84
Nubp2Q9R061 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nubp2Q9R061 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nubp2Q9R061 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nubp2Q9R061 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nubp2Q9R061 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nubp2Q9R061 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nubp2Q9R061 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nubp2Q9R061 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.28■□□□□ 0.84
Nubp2Q9R061 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nubp2Q9R061 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nubp2Q9R061 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nubp2Q9R061 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nubp2Q9R061 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nubp2Q9R061 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nubp2Q9R061 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nubp2Q9R061 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nubp2Q9R061 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nubp2Q9R061 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nubp2Q9R061 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nubp2Q9R061 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.25■□□□□ 0.83
Nubp2Q9R061 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.25■□□□□ 0.83
Nubp2Q9R061 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nubp2Q9R061 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nubp2Q9R061 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nubp2Q9R061 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nubp2Q9R061 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nubp2Q9R061 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp2Q9R061 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp2Q9R061 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp2Q9R061 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp2Q9R061 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp2Q9R061 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp2Q9R061 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nubp2Q9R061 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nubp2Q9R061 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nubp2Q9R061 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nubp2Q9R061 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nubp2Q9R061 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nubp2Q9R061 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Nubp2Q9R061 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nubp2Q9R061 Particl-201ENSMUST00000205370 1560 ntBASIC20.2■□□□□ 0.82
Nubp2Q9R061 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nubp2Q9R061 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nubp2Q9R061 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Nubp2Q9R061 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.19■□□□□ 0.82
Nubp2Q9R061 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Nubp2Q9R061 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nubp2Q9R061 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nubp2Q9R061 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nubp2Q9R061 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nubp2Q9R061 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.18■□□□□ 0.82
Nubp2Q9R061 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms