Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Snrnp48Q9D361 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.22■■□□□ 1.31
Snrnp48Q9D361 Gm37136-201ENSMUST00000194368 194 ntBASIC23.22■■□□□ 1.31
Snrnp48Q9D361 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.22■■□□□ 1.31
Snrnp48Q9D361 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Snrnp48Q9D361 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.21■■□□□ 1.31
Snrnp48Q9D361 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.21■■□□□ 1.31
Snrnp48Q9D361 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Snrnp48Q9D361 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Snrnp48Q9D361 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Snrnp48Q9D361 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Snrnp48Q9D361 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Snrnp48Q9D361 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.2■■□□□ 1.3
Snrnp48Q9D361 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.2■■□□□ 1.3
Snrnp48Q9D361 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Snrnp48Q9D361 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Snrnp48Q9D361 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Snrnp48Q9D361 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Snrnp48Q9D361 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Snrnp48Q9D361 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Snrnp48Q9D361 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Snrnp48Q9D361 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Snrnp48Q9D361 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Snrnp48Q9D361 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Snrnp48Q9D361 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Snrnp48Q9D361 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Snrnp48Q9D361 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Snrnp48Q9D361 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.16■■□□□ 1.3
Snrnp48Q9D361 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Snrnp48Q9D361 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Snrnp48Q9D361 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Snrnp48Q9D361 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Snrnp48Q9D361 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Snrnp48Q9D361 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Snrnp48Q9D361 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
Snrnp48Q9D361 Gm7432-201ENSMUST00000210343 879 ntBASIC23.14■■□□□ 1.29
Snrnp48Q9D361 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Snrnp48Q9D361 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
Snrnp48Q9D361 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.13■■□□□ 1.29
Snrnp48Q9D361 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Snrnp48Q9D361 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Snrnp48Q9D361 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Snrnp48Q9D361 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Snrnp48Q9D361 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Snrnp48Q9D361 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Snrnp48Q9D361 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
Snrnp48Q9D361 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Snrnp48Q9D361 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Snrnp48Q9D361 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Snrnp48Q9D361 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Snrnp48Q9D361 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Snrnp48Q9D361 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Snrnp48Q9D361 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Snrnp48Q9D361 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.08■■□□□ 1.29
Snrnp48Q9D361 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
Snrnp48Q9D361 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Snrnp48Q9D361 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
Snrnp48Q9D361 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Snrnp48Q9D361 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Snrnp48Q9D361 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Snrnp48Q9D361 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Snrnp48Q9D361 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Snrnp48Q9D361 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Snrnp48Q9D361 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Snrnp48Q9D361 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
Snrnp48Q9D361 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Snrnp48Q9D361 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Snrnp48Q9D361 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Snrnp48Q9D361 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Snrnp48Q9D361 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Snrnp48Q9D361 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Snrnp48Q9D361 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Snrnp48Q9D361 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Snrnp48Q9D361 Gm11599-201ENSMUST00000118720 878 ntBASIC23.02■■□□□ 1.28
Snrnp48Q9D361 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Snrnp48Q9D361 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Snrnp48Q9D361 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.01■■□□□ 1.27
Snrnp48Q9D361 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Snrnp48Q9D361 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.01■■□□□ 1.27
Snrnp48Q9D361 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Snrnp48Q9D361 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Snrnp48Q9D361 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Snrnp48Q9D361 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Snrnp48Q9D361 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23■■□□□ 1.27
Snrnp48Q9D361 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Snrnp48Q9D361 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Snrnp48Q9D361 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Snrnp48Q9D361 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Snrnp48Q9D361 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Snrnp48Q9D361 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Snrnp48Q9D361 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Snrnp48Q9D361 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Snrnp48Q9D361 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Snrnp48Q9D361 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Snrnp48Q9D361 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Snrnp48Q9D361 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Snrnp48Q9D361 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Snrnp48Q9D361 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Snrnp48Q9D361 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Snrnp48Q9D361 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms