Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tram1Q91V04 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Tram1Q91V04 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tram1Q91V04 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tram1Q91V04 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tram1Q91V04 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tram1Q91V04 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tram1Q91V04 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tram1Q91V04 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tram1Q91V04 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.91■□□□□ 0.78
Tram1Q91V04 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tram1Q91V04 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tram1Q91V04 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tram1Q91V04 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tram1Q91V04 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Tram1Q91V04 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Tram1Q91V04 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tram1Q91V04 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.89■□□□□ 0.77
Tram1Q91V04 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tram1Q91V04 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tram1Q91V04 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tram1Q91V04 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tram1Q91V04 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tram1Q91V04 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Tram1Q91V04 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tram1Q91V04 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tram1Q91V04 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tram1Q91V04 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tram1Q91V04 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tram1Q91V04 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tram1Q91V04 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.86■□□□□ 0.77
Tram1Q91V04 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tram1Q91V04 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Tram1Q91V04 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tram1Q91V04 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tram1Q91V04 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Tram1Q91V04 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Tram1Q91V04 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tram1Q91V04 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tram1Q91V04 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tram1Q91V04 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.82■□□□□ 0.76
Tram1Q91V04 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.82■□□□□ 0.76
Tram1Q91V04 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tram1Q91V04 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.82■□□□□ 0.76
Tram1Q91V04 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tram1Q91V04 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tram1Q91V04 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tram1Q91V04 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tram1Q91V04 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tram1Q91V04 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tram1Q91V04 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tram1Q91V04 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tram1Q91V04 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tram1Q91V04 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tram1Q91V04 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tram1Q91V04 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Tram1Q91V04 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tram1Q91V04 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tram1Q91V04 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.79■□□□□ 0.76
Tram1Q91V04 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tram1Q91V04 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tram1Q91V04 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tram1Q91V04 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tram1Q91V04 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tram1Q91V04 Particl-201ENSMUST00000205370 1560 ntBASIC19.78■□□□□ 0.76
Tram1Q91V04 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tram1Q91V04 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tram1Q91V04 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tram1Q91V04 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tram1Q91V04 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tram1Q91V04 Gm16148-201ENSMUST00000119653 893 ntBASIC19.76■□□□□ 0.75
Tram1Q91V04 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tram1Q91V04 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tram1Q91V04 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tram1Q91V04 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Tram1Q91V04 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tram1Q91V04 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tram1Q91V04 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tram1Q91V04 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tram1Q91V04 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tram1Q91V04 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tram1Q91V04 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tram1Q91V04 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tram1Q91V04 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.74■□□□□ 0.75
Tram1Q91V04 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.74■□□□□ 0.75
Tram1Q91V04 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Tram1Q91V04 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tram1Q91V04 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tram1Q91V04 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tram1Q91V04 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tram1Q91V04 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tram1Q91V04 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tram1Q91V04 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tram1Q91V04 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tram1Q91V04 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tram1Q91V04 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tram1Q91V04 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tram1Q91V04 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tram1Q91V04 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tram1Q91V04 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms