Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Gm12818-201ENSMUST00000117562 1349 ntBASIC30,26■■■□□ 2,44
Abca3Q8R420 Gm13889-201ENSMUST00000099689 1386 ntBASIC30,26■■■□□ 2,43
Abca3Q8R420 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,43
Abca3Q8R420 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Abca3Q8R420 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC30,25■■■□□ 2,43
Abca3Q8R420 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC30,25■■■□□ 2,43
Abca3Q8R420 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC30,25■■■□□ 2,43
Abca3Q8R420 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30,24■■■□□ 2,43
Abca3Q8R420 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Abca3Q8R420 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30,23■■■□□ 2,43
Abca3Q8R420 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Abca3Q8R420 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30,22■■■□□ 2,43
Abca3Q8R420 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30,21■■■□□ 2,43
Abca3Q8R420 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Abca3Q8R420 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC30,21■■■□□ 2,43
Abca3Q8R420 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Abca3Q8R420 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Abca3Q8R420 Gm9910-201ENSMUST00000195385 1550 ntBASIC30,2■■■□□ 2,42
Abca3Q8R420 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Abca3Q8R420 Gm22567-201ENSMUST00000175542 342 ntBASIC30,19■■■□□ 2,42
Abca3Q8R420 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC30,19■■■□□ 2,42
Abca3Q8R420 Gm5812-201ENSMUST00000061073 957 ntBASIC30,19■■■□□ 2,42
Abca3Q8R420 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30,18■■■□□ 2,42
Abca3Q8R420 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC30,17■■■□□ 2,42
Abca3Q8R420 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC30,16■■■□□ 2,42
Abca3Q8R420 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Abca3Q8R420 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Abca3Q8R420 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Abca3Q8R420 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Abca3Q8R420 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC30,16■■■□□ 2,42
Abca3Q8R420 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30,15■■■□□ 2,42
Abca3Q8R420 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC30,15■■■□□ 2,42
Abca3Q8R420 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC30,14■■■□□ 2,42
Abca3Q8R420 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30,14■■■□□ 2,42
Abca3Q8R420 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,41
Abca3Q8R420 Gm10420-201ENSMUST00000121713 882 ntBASIC30,13■■■□□ 2,41
Abca3Q8R420 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC30,13■■■□□ 2,41
Abca3Q8R420 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC30,13■■■□□ 2,41
Abca3Q8R420 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Abca3Q8R420 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30,12■■■□□ 2,41
Abca3Q8R420 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC30,12■■■□□ 2,41
Abca3Q8R420 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC30,11■■■□□ 2,41
Abca3Q8R420 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30,11■■■□□ 2,41
Abca3Q8R420 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Abca3Q8R420 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Abca3Q8R420 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Abca3Q8R420 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC30,1■■■□□ 2,41
Abca3Q8R420 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30,1■■■□□ 2,41
Abca3Q8R420 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC30,09■■■□□ 2,41
Abca3Q8R420 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC30,09■■■□□ 2,41
Abca3Q8R420 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC30,08■■■□□ 2,41
Abca3Q8R420 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC30,08■■■□□ 2,41
Abca3Q8R420 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC30,08■■■□□ 2,41
Abca3Q8R420 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC30,08■■■□□ 2,41
Abca3Q8R420 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30,08■■■□□ 2,41
Abca3Q8R420 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Abca3Q8R420 Gm5921-201ENSMUST00000075898 882 ntBASIC30,08■■■□□ 2,41
Abca3Q8R420 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Abca3Q8R420 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Abca3Q8R420 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC30,05■■■□□ 2,4
Abca3Q8R420 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30,05■■■□□ 2,4
Abca3Q8R420 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30,05■■■□□ 2,4
Abca3Q8R420 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30,04■■■□□ 2,4
Abca3Q8R420 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30,03■■■□□ 2,4
Abca3Q8R420 Gm5067-201ENSMUST00000170449 1009 ntBASIC30,03■■■□□ 2,4
Abca3Q8R420 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30,03■■■□□ 2,4
Abca3Q8R420 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC30,03■■■□□ 2,4
Abca3Q8R420 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30,02■■■□□ 2,4
Abca3Q8R420 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Abca3Q8R420 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC30,01■■■□□ 2,39
Abca3Q8R420 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Abca3Q8R420 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC30■■■□□ 2,39
Abca3Q8R420 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Abca3Q8R420 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Abca3Q8R420 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Abca3Q8R420 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Abca3Q8R420 Gm9812-201ENSMUST00000061934 968 ntBASIC29,99■■■□□ 2,39
Abca3Q8R420 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29,98■■■□□ 2,39
Abca3Q8R420 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Abca3Q8R420 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29,98■■■□□ 2,39
Abca3Q8R420 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC29,97■■■□□ 2,39
Abca3Q8R420 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29,97■■■□□ 2,39
Abca3Q8R420 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Abca3Q8R420 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC29,96■■■□□ 2,39
Abca3Q8R420 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC29,96■■■□□ 2,39
Abca3Q8R420 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29,96■■■□□ 2,39
Abca3Q8R420 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC29,95■■■□□ 2,39
Abca3Q8R420 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29,94■■■□□ 2,38
Abca3Q8R420 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC29,93■■■□□ 2,38
Abca3Q8R420 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Abca3Q8R420 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Abca3Q8R420 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC29,92■■■□□ 2,38
Abca3Q8R420 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC29,92■■■□□ 2,38
Abca3Q8R420 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC29,92■■■□□ 2,38
Abca3Q8R420 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC29,92■■■□□ 2,38
Abca3Q8R420 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC29,92■■■□□ 2,38
Abca3Q8R420 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29,91■■■□□ 2,38
Abca3Q8R420 Zxda-201ENSMUST00000117281 2621 ntBASIC29,91■■■□□ 2,38
Abca3Q8R420 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC29,91■■■□□ 2,38
Abca3Q8R420 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC29,91■■■□□ 2,38
Retrieved 100 of 76,532 protein–RNA pairs in 284,1 ms