Protein–RNA interactions for Protein: Q8R0W6

Ndfip1, NEDD4 family-interacting protein 1, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndfip1Q8R0W6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndfip1Q8R0W6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ndfip1Q8R0W6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Ndfip1Q8R0W6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ndfip1Q8R0W6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndfip1Q8R0W6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndfip1Q8R0W6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.06■□□□□ 0.48
Ndfip1Q8R0W6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndfip1Q8R0W6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ndfip1Q8R0W6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndfip1Q8R0W6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndfip1Q8R0W6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndfip1Q8R0W6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndfip1Q8R0W6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndfip1Q8R0W6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndfip1Q8R0W6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndfip1Q8R0W6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.04■□□□□ 0.48
Ndfip1Q8R0W6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndfip1Q8R0W6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndfip1Q8R0W6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndfip1Q8R0W6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndfip1Q8R0W6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndfip1Q8R0W6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ndfip1Q8R0W6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndfip1Q8R0W6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.02■□□□□ 0.48
Ndfip1Q8R0W6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndfip1Q8R0W6 Gm24970-201ENSMUST00000175582 82 ntBASIC18.02■□□□□ 0.48
Ndfip1Q8R0W6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.02■□□□□ 0.48
Ndfip1Q8R0W6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ndfip1Q8R0W6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndfip1Q8R0W6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndfip1Q8R0W6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndfip1Q8R0W6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndfip1Q8R0W6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndfip1Q8R0W6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndfip1Q8R0W6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndfip1Q8R0W6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndfip1Q8R0W6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ndfip1Q8R0W6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ndfip1Q8R0W6 Gm9397-201ENSMUST00000200125 605 ntBASIC17.99■□□□□ 0.47
Ndfip1Q8R0W6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Ndfip1Q8R0W6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndfip1Q8R0W6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndfip1Q8R0W6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ndfip1Q8R0W6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Ndfip1Q8R0W6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndfip1Q8R0W6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndfip1Q8R0W6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.98■□□□□ 0.47
Ndfip1Q8R0W6 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.98■□□□□ 0.47
Ndfip1Q8R0W6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndfip1Q8R0W6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ndfip1Q8R0W6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndfip1Q8R0W6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ndfip1Q8R0W6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndfip1Q8R0W6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.97■□□□□ 0.47
Ndfip1Q8R0W6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndfip1Q8R0W6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndfip1Q8R0W6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndfip1Q8R0W6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ndfip1Q8R0W6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.96■□□□□ 0.47
Ndfip1Q8R0W6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.96■□□□□ 0.47
Ndfip1Q8R0W6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ndfip1Q8R0W6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndfip1Q8R0W6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndfip1Q8R0W6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ndfip1Q8R0W6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndfip1Q8R0W6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ndfip1Q8R0W6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndfip1Q8R0W6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndfip1Q8R0W6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.94■□□□□ 0.46
Ndfip1Q8R0W6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndfip1Q8R0W6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndfip1Q8R0W6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ndfip1Q8R0W6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndfip1Q8R0W6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndfip1Q8R0W6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndfip1Q8R0W6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.92■□□□□ 0.46
Ndfip1Q8R0W6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndfip1Q8R0W6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.92■□□□□ 0.46
Ndfip1Q8R0W6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ndfip1Q8R0W6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ndfip1Q8R0W6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndfip1Q8R0W6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndfip1Q8R0W6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndfip1Q8R0W6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Ndfip1Q8R0W6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndfip1Q8R0W6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ndfip1Q8R0W6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndfip1Q8R0W6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
Ndfip1Q8R0W6 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 Particl-201ENSMUST00000205370 1560 ntBASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ndfip1Q8R0W6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms