Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vrk3Q8K3G5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk3Q8K3G5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk3Q8K3G5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.55■□□□□ 0.72
Vrk3Q8K3G5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk3Q8K3G5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk3Q8K3G5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk3Q8K3G5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk3Q8K3G5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.53■□□□□ 0.72
Vrk3Q8K3G5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk3Q8K3G5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Vrk3Q8K3G5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk3Q8K3G5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vrk3Q8K3G5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk3Q8K3G5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Vrk3Q8K3G5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk3Q8K3G5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk3Q8K3G5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk3Q8K3G5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vrk3Q8K3G5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vrk3Q8K3G5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vrk3Q8K3G5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vrk3Q8K3G5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vrk3Q8K3G5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vrk3Q8K3G5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk3Q8K3G5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk3Q8K3G5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk3Q8K3G5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk3Q8K3G5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk3Q8K3G5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk3Q8K3G5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vrk3Q8K3G5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vrk3Q8K3G5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Vrk3Q8K3G5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vrk3Q8K3G5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vrk3Q8K3G5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vrk3Q8K3G5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Vrk3Q8K3G5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.47■□□□□ 0.71
Vrk3Q8K3G5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vrk3Q8K3G5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vrk3Q8K3G5 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.45■□□□□ 0.7
Vrk3Q8K3G5 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.45■□□□□ 0.7
Vrk3Q8K3G5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.45■□□□□ 0.7
Vrk3Q8K3G5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk3Q8K3G5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk3Q8K3G5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk3Q8K3G5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Vrk3Q8K3G5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk3Q8K3G5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.44■□□□□ 0.7
Vrk3Q8K3G5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vrk3Q8K3G5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk3Q8K3G5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk3Q8K3G5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.43■□□□□ 0.7
Vrk3Q8K3G5 Nkain2-201ENSMUST00000092602 558 ntBASIC19.43■□□□□ 0.7
Vrk3Q8K3G5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vrk3Q8K3G5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.42■□□□□ 0.7
Vrk3Q8K3G5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.42■□□□□ 0.7
Vrk3Q8K3G5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vrk3Q8K3G5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.42■□□□□ 0.7
Vrk3Q8K3G5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk3Q8K3G5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk3Q8K3G5 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.41■□□□□ 0.7
Vrk3Q8K3G5 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.41■□□□□ 0.7
Vrk3Q8K3G5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk3Q8K3G5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk3Q8K3G5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk3Q8K3G5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vrk3Q8K3G5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vrk3Q8K3G5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Vrk3Q8K3G5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vrk3Q8K3G5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vrk3Q8K3G5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Vrk3Q8K3G5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vrk3Q8K3G5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vrk3Q8K3G5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vrk3Q8K3G5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.39■□□□□ 0.69
Vrk3Q8K3G5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vrk3Q8K3G5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vrk3Q8K3G5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vrk3Q8K3G5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Vrk3Q8K3G5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk3Q8K3G5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vrk3Q8K3G5 Particl-201ENSMUST00000205370 1560 ntBASIC19.37■□□□□ 0.69
Vrk3Q8K3G5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vrk3Q8K3G5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.37■□□□□ 0.69
Vrk3Q8K3G5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk3Q8K3G5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Vrk3Q8K3G5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk3Q8K3G5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Vrk3Q8K3G5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Vrk3Q8K3G5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms