Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc49a3Q8CE47 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc49a3Q8CE47 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc49a3Q8CE47 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc49a3Q8CE47 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Slc49a3Q8CE47 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc49a3Q8CE47 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc49a3Q8CE47 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Slc49a3Q8CE47 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc49a3Q8CE47 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Slc49a3Q8CE47 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc49a3Q8CE47 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc49a3Q8CE47 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.37■■□□□ 1.01
Slc49a3Q8CE47 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc49a3Q8CE47 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc49a3Q8CE47 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc49a3Q8CE47 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.35■■□□□ 1.01
Slc49a3Q8CE47 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc49a3Q8CE47 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc49a3Q8CE47 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Slc49a3Q8CE47 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc49a3Q8CE47 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc49a3Q8CE47 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc49a3Q8CE47 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc49a3Q8CE47 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc49a3Q8CE47 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Slc49a3Q8CE47 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc49a3Q8CE47 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Slc49a3Q8CE47 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Slc49a3Q8CE47 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc49a3Q8CE47 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc49a3Q8CE47 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc49a3Q8CE47 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc49a3Q8CE47 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc49a3Q8CE47 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc49a3Q8CE47 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc49a3Q8CE47 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Slc49a3Q8CE47 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc49a3Q8CE47 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc49a3Q8CE47 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Slc49a3Q8CE47 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc49a3Q8CE47 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc49a3Q8CE47 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Slc49a3Q8CE47 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc49a3Q8CE47 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc49a3Q8CE47 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.29■■□□□ 1
Slc49a3Q8CE47 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc49a3Q8CE47 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Slc49a3Q8CE47 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc49a3Q8CE47 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Slc49a3Q8CE47 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc49a3Q8CE47 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc49a3Q8CE47 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc49a3Q8CE47 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Slc49a3Q8CE47 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc49a3Q8CE47 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.27■■□□□ 1
Slc49a3Q8CE47 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc49a3Q8CE47 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc49a3Q8CE47 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc49a3Q8CE47 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc49a3Q8CE47 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc49a3Q8CE47 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc49a3Q8CE47 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc49a3Q8CE47 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc49a3Q8CE47 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc49a3Q8CE47 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc49a3Q8CE47 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Slc49a3Q8CE47 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.23■□□□□ 0.99
Slc49a3Q8CE47 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc49a3Q8CE47 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc49a3Q8CE47 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc49a3Q8CE47 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.23■□□□□ 0.99
Slc49a3Q8CE47 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc49a3Q8CE47 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc49a3Q8CE47 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Slc49a3Q8CE47 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc49a3Q8CE47 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Slc49a3Q8CE47 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc49a3Q8CE47 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc49a3Q8CE47 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc49a3Q8CE47 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc49a3Q8CE47 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc49a3Q8CE47 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc49a3Q8CE47 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc49a3Q8CE47 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc49a3Q8CE47 Gm24804-201ENSMUST00000174982 85 ntBASIC21.18■□□□□ 0.98
Slc49a3Q8CE47 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc49a3Q8CE47 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Slc49a3Q8CE47 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Slc49a3Q8CE47 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Slc49a3Q8CE47 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Slc49a3Q8CE47 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.16■□□□□ 0.98
Slc49a3Q8CE47 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slc49a3Q8CE47 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc49a3Q8CE47 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc49a3Q8CE47 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Slc49a3Q8CE47 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc49a3Q8CE47 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Slc49a3Q8CE47 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Slc49a3Q8CE47 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms