Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rft1Q8C3B8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rft1Q8C3B8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rft1Q8C3B8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.49■□□□□ 0.87
Rft1Q8C3B8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rft1Q8C3B8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rft1Q8C3B8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rft1Q8C3B8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rft1Q8C3B8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rft1Q8C3B8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rft1Q8C3B8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rft1Q8C3B8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rft1Q8C3B8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rft1Q8C3B8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rft1Q8C3B8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rft1Q8C3B8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rft1Q8C3B8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rft1Q8C3B8 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.47■□□□□ 0.87
Rft1Q8C3B8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rft1Q8C3B8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rft1Q8C3B8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rft1Q8C3B8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rft1Q8C3B8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rft1Q8C3B8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rft1Q8C3B8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rft1Q8C3B8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rft1Q8C3B8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rft1Q8C3B8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rft1Q8C3B8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rft1Q8C3B8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rft1Q8C3B8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rft1Q8C3B8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.44■□□□□ 0.86
Rft1Q8C3B8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Rft1Q8C3B8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rft1Q8C3B8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rft1Q8C3B8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rft1Q8C3B8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rft1Q8C3B8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rft1Q8C3B8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rft1Q8C3B8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Rft1Q8C3B8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rft1Q8C3B8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rft1Q8C3B8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rft1Q8C3B8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rft1Q8C3B8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rft1Q8C3B8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rft1Q8C3B8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rft1Q8C3B8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rft1Q8C3B8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Rft1Q8C3B8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rft1Q8C3B8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Rft1Q8C3B8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rft1Q8C3B8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rft1Q8C3B8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.36■□□□□ 0.85
Rft1Q8C3B8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rft1Q8C3B8 Gm6821-201ENSMUST00000107540 542 ntBASIC20.35■□□□□ 0.85
Rft1Q8C3B8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Rft1Q8C3B8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rft1Q8C3B8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rft1Q8C3B8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
Rft1Q8C3B8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rft1Q8C3B8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rft1Q8C3B8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rft1Q8C3B8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.34■□□□□ 0.85
Rft1Q8C3B8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.34■□□□□ 0.85
Rft1Q8C3B8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rft1Q8C3B8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rft1Q8C3B8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rft1Q8C3B8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rft1Q8C3B8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Rft1Q8C3B8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rft1Q8C3B8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Rft1Q8C3B8 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.32■□□□□ 0.84
Rft1Q8C3B8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rft1Q8C3B8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rft1Q8C3B8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rft1Q8C3B8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rft1Q8C3B8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rft1Q8C3B8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rft1Q8C3B8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rft1Q8C3B8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rft1Q8C3B8 Gm8503-201ENSMUST00000118131 455 ntBASIC20.31■□□□□ 0.84
Rft1Q8C3B8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.31■□□□□ 0.84
Rft1Q8C3B8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rft1Q8C3B8 Nkain2-201ENSMUST00000092602 558 ntBASIC20.31■□□□□ 0.84
Rft1Q8C3B8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.31■□□□□ 0.84
Rft1Q8C3B8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rft1Q8C3B8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rft1Q8C3B8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rft1Q8C3B8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rft1Q8C3B8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rft1Q8C3B8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rft1Q8C3B8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rft1Q8C3B8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rft1Q8C3B8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rft1Q8C3B8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.28■□□□□ 0.84
Rft1Q8C3B8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rft1Q8C3B8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rft1Q8C3B8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.27■□□□□ 0.84
Rft1Q8C3B8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms