Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.89■■□□□ 1.09
Ppp1r3eQ8BRJ4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ppp1r3eQ8BRJ4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ppp1r3eQ8BRJ4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ppp1r3eQ8BRJ4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ppp1r3eQ8BRJ4 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.87■■□□□ 1.09
Ppp1r3eQ8BRJ4 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.87■■□□□ 1.09
Ppp1r3eQ8BRJ4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ppp1r3eQ8BRJ4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ppp1r3eQ8BRJ4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ppp1r3eQ8BRJ4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ppp1r3eQ8BRJ4 Gm45855-201ENSMUST00000212546 880 ntBASIC21.86■■□□□ 1.09
Ppp1r3eQ8BRJ4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ppp1r3eQ8BRJ4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ppp1r3eQ8BRJ4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.85■■□□□ 1.09
Ppp1r3eQ8BRJ4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ppp1r3eQ8BRJ4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.85■■□□□ 1.09
Ppp1r3eQ8BRJ4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ppp1r3eQ8BRJ4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ppp1r3eQ8BRJ4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ppp1r3eQ8BRJ4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Ppp1r3eQ8BRJ4 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.84■■□□□ 1.09
Ppp1r3eQ8BRJ4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ppp1r3eQ8BRJ4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.83■■□□□ 1.09
Ppp1r3eQ8BRJ4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Ppp1r3eQ8BRJ4 Particl-201ENSMUST00000205370 1560 ntBASIC21.82■■□□□ 1.08
Ppp1r3eQ8BRJ4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ppp1r3eQ8BRJ4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ppp1r3eQ8BRJ4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.81■■□□□ 1.08
Ppp1r3eQ8BRJ4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ppp1r3eQ8BRJ4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ppp1r3eQ8BRJ4 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.8■■□□□ 1.08
Ppp1r3eQ8BRJ4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ppp1r3eQ8BRJ4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ppp1r3eQ8BRJ4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ppp1r3eQ8BRJ4 Gm30023-201ENSMUST00000197970 889 ntBASIC21.78■■□□□ 1.08
Ppp1r3eQ8BRJ4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ppp1r3eQ8BRJ4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ppp1r3eQ8BRJ4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ppp1r3eQ8BRJ4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Ppp1r3eQ8BRJ4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.77■■□□□ 1.08
Ppp1r3eQ8BRJ4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Ppp1r3eQ8BRJ4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ppp1r3eQ8BRJ4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ppp1r3eQ8BRJ4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ppp1r3eQ8BRJ4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ppp1r3eQ8BRJ4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ppp1r3eQ8BRJ4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ppp1r3eQ8BRJ4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ppp1r3eQ8BRJ4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.75■■□□□ 1.07
Ppp1r3eQ8BRJ4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ppp1r3eQ8BRJ4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ppp1r3eQ8BRJ4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ppp1r3eQ8BRJ4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ppp1r3eQ8BRJ4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ppp1r3eQ8BRJ4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ppp1r3eQ8BRJ4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ppp1r3eQ8BRJ4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.72■■□□□ 1.07
Ppp1r3eQ8BRJ4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3eQ8BRJ4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3eQ8BRJ4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3eQ8BRJ4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3eQ8BRJ4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3eQ8BRJ4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3eQ8BRJ4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3eQ8BRJ4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.71■■□□□ 1.07
Ppp1r3eQ8BRJ4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3eQ8BRJ4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ppp1r3eQ8BRJ4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Ppp1r3eQ8BRJ4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3eQ8BRJ4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Ppp1r3eQ8BRJ4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3eQ8BRJ4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ppp1r3eQ8BRJ4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ppp1r3eQ8BRJ4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3eQ8BRJ4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3eQ8BRJ4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3eQ8BRJ4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3eQ8BRJ4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3eQ8BRJ4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3eQ8BRJ4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3eQ8BRJ4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.65■■□□□ 1.06
Ppp1r3eQ8BRJ4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3eQ8BRJ4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.65■■□□□ 1.06
Ppp1r3eQ8BRJ4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.65■■□□□ 1.06
Ppp1r3eQ8BRJ4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.65■■□□□ 1.06
Ppp1r3eQ8BRJ4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3eQ8BRJ4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ppp1r3eQ8BRJ4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ppp1r3eQ8BRJ4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ppp1r3eQ8BRJ4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ppp1r3eQ8BRJ4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ppp1r3eQ8BRJ4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ppp1r3eQ8BRJ4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ppp1r3eQ8BRJ4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ppp1r3eQ8BRJ4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.62■■□□□ 1.05
Ppp1r3eQ8BRJ4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ppp1r3eQ8BRJ4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp1r3eQ8BRJ4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ppp1r3eQ8BRJ4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms