Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Foxd3Q61060 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.14■□□□□ 0.97
Foxd3Q61060 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxd3Q61060 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxd3Q61060 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxd3Q61060 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.12■□□□□ 0.97
Foxd3Q61060 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Foxd3Q61060 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.12■□□□□ 0.97
Foxd3Q61060 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.12■□□□□ 0.97
Foxd3Q61060 Gm15039-201ENSMUST00000118914 875 ntBASIC21.11■□□□□ 0.97
Foxd3Q61060 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxd3Q61060 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxd3Q61060 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Foxd3Q61060 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxd3Q61060 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxd3Q61060 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Foxd3Q61060 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Foxd3Q61060 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxd3Q61060 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Foxd3Q61060 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Foxd3Q61060 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Foxd3Q61060 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Foxd3Q61060 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Foxd3Q61060 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Foxd3Q61060 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Foxd3Q61060 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Foxd3Q61060 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.05■□□□□ 0.96
Foxd3Q61060 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Foxd3Q61060 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Foxd3Q61060 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Foxd3Q61060 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Foxd3Q61060 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Foxd3Q61060 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.04■□□□□ 0.96
Foxd3Q61060 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Foxd3Q61060 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Foxd3Q61060 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxd3Q61060 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Foxd3Q61060 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxd3Q61060 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxd3Q61060 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxd3Q61060 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxd3Q61060 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxd3Q61060 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxd3Q61060 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxd3Q61060 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Foxd3Q61060 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.01■□□□□ 0.95
Foxd3Q61060 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.01■□□□□ 0.95
Foxd3Q61060 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Foxd3Q61060 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.01■□□□□ 0.95
Foxd3Q61060 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxd3Q61060 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21■□□□□ 0.95
Foxd3Q61060 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21■□□□□ 0.95
Foxd3Q61060 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Foxd3Q61060 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd3Q61060 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Foxd3Q61060 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd3Q61060 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd3Q61060 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd3Q61060 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd3Q61060 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd3Q61060 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Foxd3Q61060 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd3Q61060 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd3Q61060 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd3Q61060 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd3Q61060 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd3Q61060 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd3Q61060 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd3Q61060 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Foxd3Q61060 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd3Q61060 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.96■□□□□ 0.95
Foxd3Q61060 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd3Q61060 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.96■□□□□ 0.95
Foxd3Q61060 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd3Q61060 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd3Q61060 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd3Q61060 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd3Q61060 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.95■□□□□ 0.94
Foxd3Q61060 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Foxd3Q61060 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd3Q61060 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd3Q61060 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd3Q61060 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Foxd3Q61060 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Foxd3Q61060 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd3Q61060 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd3Q61060 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Foxd3Q61060 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd3Q61060 Nkain2-201ENSMUST00000092602 558 ntBASIC20.93■□□□□ 0.94
Foxd3Q61060 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd3Q61060 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Foxd3Q61060 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd3Q61060 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd3Q61060 Particl-201ENSMUST00000205370 1560 ntBASIC20.92■□□□□ 0.94
Foxd3Q61060 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxd3Q61060 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Foxd3Q61060 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd3Q61060 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd3Q61060 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Foxd3Q61060 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms