Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.83■■□□□ 1.09
Ripk1Q60855 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk1Q60855 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ripk1Q60855 Particl-201ENSMUST00000205370 1560 ntBASIC21.82■■□□□ 1.08
Ripk1Q60855 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.81■■□□□ 1.08
Ripk1Q60855 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk1Q60855 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk1Q60855 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk1Q60855 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk1Q60855 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ripk1Q60855 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ripk1Q60855 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk1Q60855 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.8■■□□□ 1.08
Ripk1Q60855 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk1Q60855 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ripk1Q60855 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.79■■□□□ 1.08
Ripk1Q60855 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.79■■□□□ 1.08
Ripk1Q60855 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.79■■□□□ 1.08
Ripk1Q60855 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ripk1Q60855 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ripk1Q60855 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ripk1Q60855 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ripk1Q60855 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.76■■□□□ 1.07
Ripk1Q60855 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ripk1Q60855 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ripk1Q60855 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ripk1Q60855 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ripk1Q60855 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk1Q60855 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk1Q60855 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ripk1Q60855 Gm8503-201ENSMUST00000118131 455 ntBASIC21.75■■□□□ 1.07
Ripk1Q60855 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Ripk1Q60855 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ripk1Q60855 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ripk1Q60855 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.74■■□□□ 1.07
Ripk1Q60855 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ripk1Q60855 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ripk1Q60855 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ripk1Q60855 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ripk1Q60855 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ripk1Q60855 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ripk1Q60855 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ripk1Q60855 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ripk1Q60855 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ripk1Q60855 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.71■■□□□ 1.07
Ripk1Q60855 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ripk1Q60855 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ripk1Q60855 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ripk1Q60855 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ripk1Q60855 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ripk1Q60855 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ripk1Q60855 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ripk1Q60855 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ripk1Q60855 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ripk1Q60855 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.65■■□□□ 1.06
Ripk1Q60855 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ripk1Q60855 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ripk1Q60855 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.64■■□□□ 1.06
Ripk1Q60855 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ripk1Q60855 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ripk1Q60855 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ripk1Q60855 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ripk1Q60855 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ripk1Q60855 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ripk1Q60855 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ripk1Q60855 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ripk1Q60855 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ripk1Q60855 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ripk1Q60855 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.62■■□□□ 1.05
Ripk1Q60855 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ripk1Q60855 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ripk1Q60855 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ripk1Q60855 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Ripk1Q60855 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ripk1Q60855 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Ripk1Q60855 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ripk1Q60855 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ripk1Q60855 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk1Q60855 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk1Q60855 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk1Q60855 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk1Q60855 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ripk1Q60855 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Ripk1Q60855 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk1Q60855 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk1Q60855 Gm37136-201ENSMUST00000194368 194 ntBASIC21.59■■□□□ 1.05
Ripk1Q60855 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk1Q60855 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk1Q60855 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ripk1Q60855 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ripk1Q60855 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ripk1Q60855 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ripk1Q60855 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ripk1Q60855 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ripk1Q60855 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
Ripk1Q60855 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ripk1Q60855 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk1Q60855 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk1Q60855 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk1Q60855 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms