Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Rc3h1Q4VGL6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rc3h1Q4VGL6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rc3h1Q4VGL6 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.18■■□□□ 1.94
Rc3h1Q4VGL6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Rc3h1Q4VGL6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Rc3h1Q4VGL6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rc3h1Q4VGL6 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.18■■□□□ 1.94
Rc3h1Q4VGL6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rc3h1Q4VGL6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rc3h1Q4VGL6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.17■■□□□ 1.94
Rc3h1Q4VGL6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rc3h1Q4VGL6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rc3h1Q4VGL6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rc3h1Q4VGL6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.16■■□□□ 1.94
Rc3h1Q4VGL6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rc3h1Q4VGL6 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.15■■□□□ 1.94
Rc3h1Q4VGL6 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.15■■□□□ 1.94
Rc3h1Q4VGL6 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.15■■□□□ 1.94
Rc3h1Q4VGL6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rc3h1Q4VGL6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rc3h1Q4VGL6 Scarna2-201ENSMUST00000157560 414 ntBASIC27.14■■□□□ 1.94
Rc3h1Q4VGL6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rc3h1Q4VGL6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rc3h1Q4VGL6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rc3h1Q4VGL6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.11■■□□□ 1.93
Rc3h1Q4VGL6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rc3h1Q4VGL6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.11■■□□□ 1.93
Rc3h1Q4VGL6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rc3h1Q4VGL6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Rc3h1Q4VGL6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rc3h1Q4VGL6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Rc3h1Q4VGL6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.09■■□□□ 1.93
Rc3h1Q4VGL6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rc3h1Q4VGL6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rc3h1Q4VGL6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Rc3h1Q4VGL6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Rc3h1Q4VGL6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Rc3h1Q4VGL6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rc3h1Q4VGL6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.06■■□□□ 1.92
Rc3h1Q4VGL6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rc3h1Q4VGL6 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.06■■□□□ 1.92
Rc3h1Q4VGL6 Gm16437-201ENSMUST00000025669 507 ntBASIC27.05■■□□□ 1.92
Rc3h1Q4VGL6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rc3h1Q4VGL6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rc3h1Q4VGL6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Rc3h1Q4VGL6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rc3h1Q4VGL6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.04■■□□□ 1.92
Rc3h1Q4VGL6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.04■■□□□ 1.92
Rc3h1Q4VGL6 Gm9806-201ENSMUST00000051080 552 ntBASIC27.04■■□□□ 1.92
Rc3h1Q4VGL6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rc3h1Q4VGL6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Rc3h1Q4VGL6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rc3h1Q4VGL6 Cap2-205ENSMUST00000225824 1634 ntBASIC27.03■■□□□ 1.92
Rc3h1Q4VGL6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rc3h1Q4VGL6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rc3h1Q4VGL6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rc3h1Q4VGL6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rc3h1Q4VGL6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Rc3h1Q4VGL6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rc3h1Q4VGL6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rc3h1Q4VGL6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.99■■□□□ 1.91
Rc3h1Q4VGL6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Rc3h1Q4VGL6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rc3h1Q4VGL6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Rc3h1Q4VGL6 Gm11687-201ENSMUST00000118911 886 ntBASIC26.97■■□□□ 1.91
Rc3h1Q4VGL6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rc3h1Q4VGL6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Rc3h1Q4VGL6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rc3h1Q4VGL6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rc3h1Q4VGL6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rc3h1Q4VGL6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Rc3h1Q4VGL6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Rc3h1Q4VGL6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Rc3h1Q4VGL6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Rc3h1Q4VGL6 Gm9812-201ENSMUST00000061934 968 ntBASIC26.95■■□□□ 1.9
Rc3h1Q4VGL6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Rc3h1Q4VGL6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Rc3h1Q4VGL6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rc3h1Q4VGL6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rc3h1Q4VGL6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Rc3h1Q4VGL6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Rc3h1Q4VGL6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rc3h1Q4VGL6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rc3h1Q4VGL6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Rc3h1Q4VGL6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Rc3h1Q4VGL6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.92■■□□□ 1.9
Rc3h1Q4VGL6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.92■■□□□ 1.9
Rc3h1Q4VGL6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.92■■□□□ 1.9
Rc3h1Q4VGL6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Rc3h1Q4VGL6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.91■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms