Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.15■■□□□ 1.14
Xrra1Q3U3V8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Xrra1Q3U3V8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Xrra1Q3U3V8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Xrra1Q3U3V8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Xrra1Q3U3V8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Xrra1Q3U3V8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Xrra1Q3U3V8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Xrra1Q3U3V8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Xrra1Q3U3V8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Xrra1Q3U3V8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Xrra1Q3U3V8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Xrra1Q3U3V8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Xrra1Q3U3V8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Xrra1Q3U3V8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Xrra1Q3U3V8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Xrra1Q3U3V8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Xrra1Q3U3V8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Xrra1Q3U3V8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Xrra1Q3U3V8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Xrra1Q3U3V8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Xrra1Q3U3V8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Xrra1Q3U3V8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Xrra1Q3U3V8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Xrra1Q3U3V8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.1■■□□□ 1.13
Xrra1Q3U3V8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Xrra1Q3U3V8 Gm7432-201ENSMUST00000210343 879 ntBASIC22.09■■□□□ 1.13
Xrra1Q3U3V8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Xrra1Q3U3V8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.08■■□□□ 1.13
Xrra1Q3U3V8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.08■■□□□ 1.13
Xrra1Q3U3V8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Xrra1Q3U3V8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Xrra1Q3U3V8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.08■■□□□ 1.13
Xrra1Q3U3V8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Xrra1Q3U3V8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Xrra1Q3U3V8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Xrra1Q3U3V8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.12
Xrra1Q3U3V8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.07■■□□□ 1.12
Xrra1Q3U3V8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Xrra1Q3U3V8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Xrra1Q3U3V8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Xrra1Q3U3V8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Xrra1Q3U3V8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Xrra1Q3U3V8 Particl-201ENSMUST00000205370 1560 ntBASIC22.05■■□□□ 1.12
Xrra1Q3U3V8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Xrra1Q3U3V8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Xrra1Q3U3V8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Xrra1Q3U3V8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Xrra1Q3U3V8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Xrra1Q3U3V8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Xrra1Q3U3V8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
Xrra1Q3U3V8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Xrra1Q3U3V8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Xrra1Q3U3V8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Xrra1Q3U3V8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Xrra1Q3U3V8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Xrra1Q3U3V8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.01■■□□□ 1.11
Xrra1Q3U3V8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22■■□□□ 1.11
Xrra1Q3U3V8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Xrra1Q3U3V8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.99■■□□□ 1.11
Xrra1Q3U3V8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.99■■□□□ 1.11
Xrra1Q3U3V8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Xrra1Q3U3V8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Xrra1Q3U3V8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Xrra1Q3U3V8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Xrra1Q3U3V8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Xrra1Q3U3V8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Xrra1Q3U3V8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Xrra1Q3U3V8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Xrra1Q3U3V8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Xrra1Q3U3V8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Xrra1Q3U3V8 Gm11599-201ENSMUST00000118720 878 ntBASIC21.96■■□□□ 1.11
Xrra1Q3U3V8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Xrra1Q3U3V8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Xrra1Q3U3V8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Xrra1Q3U3V8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Xrra1Q3U3V8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Xrra1Q3U3V8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Xrra1Q3U3V8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Xrra1Q3U3V8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Xrra1Q3U3V8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.93■■□□□ 1.1
Xrra1Q3U3V8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Xrra1Q3U3V8 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.92■■□□□ 1.1
Xrra1Q3U3V8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Xrra1Q3U3V8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.92■■□□□ 1.1
Xrra1Q3U3V8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Xrra1Q3U3V8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Xrra1Q3U3V8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.91■■□□□ 1.1
Xrra1Q3U3V8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
Xrra1Q3U3V8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Xrra1Q3U3V8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.9■■□□□ 1.1
Xrra1Q3U3V8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Xrra1Q3U3V8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Xrra1Q3U3V8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Xrra1Q3U3V8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Xrra1Q3U3V8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Xrra1Q3U3V8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Xrra1Q3U3V8 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.88■■□□□ 1.09
Xrra1Q3U3V8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Xrra1Q3U3V8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms