Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fndc4Q3TR08 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.63■□□□□ 0.73
Fndc4Q3TR08 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Fndc4Q3TR08 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fndc4Q3TR08 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fndc4Q3TR08 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Fndc4Q3TR08 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Fndc4Q3TR08 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fndc4Q3TR08 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fndc4Q3TR08 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fndc4Q3TR08 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Fndc4Q3TR08 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fndc4Q3TR08 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.6■□□□□ 0.73
Fndc4Q3TR08 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.6■□□□□ 0.73
Fndc4Q3TR08 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fndc4Q3TR08 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fndc4Q3TR08 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Fndc4Q3TR08 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fndc4Q3TR08 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Fndc4Q3TR08 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Fndc4Q3TR08 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fndc4Q3TR08 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.57■□□□□ 0.72
Fndc4Q3TR08 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fndc4Q3TR08 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.56■□□□□ 0.72
Fndc4Q3TR08 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Fndc4Q3TR08 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fndc4Q3TR08 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Fndc4Q3TR08 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Fndc4Q3TR08 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Fndc4Q3TR08 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fndc4Q3TR08 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.55■□□□□ 0.72
Fndc4Q3TR08 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.55■□□□□ 0.72
Fndc4Q3TR08 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fndc4Q3TR08 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Fndc4Q3TR08 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fndc4Q3TR08 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.54■□□□□ 0.72
Fndc4Q3TR08 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fndc4Q3TR08 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fndc4Q3TR08 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fndc4Q3TR08 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fndc4Q3TR08 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fndc4Q3TR08 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fndc4Q3TR08 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fndc4Q3TR08 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fndc4Q3TR08 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fndc4Q3TR08 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Fndc4Q3TR08 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fndc4Q3TR08 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Fndc4Q3TR08 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Fndc4Q3TR08 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Fndc4Q3TR08 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fndc4Q3TR08 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Fndc4Q3TR08 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Fndc4Q3TR08 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Fndc4Q3TR08 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fndc4Q3TR08 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.5■□□□□ 0.71
Fndc4Q3TR08 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Fndc4Q3TR08 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Fndc4Q3TR08 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fndc4Q3TR08 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fndc4Q3TR08 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fndc4Q3TR08 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fndc4Q3TR08 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fndc4Q3TR08 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fndc4Q3TR08 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Fndc4Q3TR08 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc4Q3TR08 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc4Q3TR08 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc4Q3TR08 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc4Q3TR08 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fndc4Q3TR08 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.47■□□□□ 0.71
Fndc4Q3TR08 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fndc4Q3TR08 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc4Q3TR08 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Fndc4Q3TR08 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.46■□□□□ 0.71
Fndc4Q3TR08 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc4Q3TR08 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Fndc4Q3TR08 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc4Q3TR08 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Fndc4Q3TR08 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc4Q3TR08 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc4Q3TR08 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fndc4Q3TR08 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc4Q3TR08 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Fndc4Q3TR08 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Fndc4Q3TR08 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.44■□□□□ 0.7
Fndc4Q3TR08 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Fndc4Q3TR08 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fndc4Q3TR08 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Fndc4Q3TR08 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fndc4Q3TR08 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Fndc4Q3TR08 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Fndc4Q3TR08 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc4Q3TR08 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.42■□□□□ 0.7
Fndc4Q3TR08 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Fndc4Q3TR08 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc4Q3TR08 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc4Q3TR08 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc4Q3TR08 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fndc4Q3TR08 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms