Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.91■■□□□ 1.1
Treml4Q3LRV9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Treml4Q3LRV9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Treml4Q3LRV9 Mir3960-201ENSMUST00000198213 73 ntBASIC21.9■■□□□ 1.1
Treml4Q3LRV9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Treml4Q3LRV9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Treml4Q3LRV9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Treml4Q3LRV9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Treml4Q3LRV9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Treml4Q3LRV9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.88■■□□□ 1.09
Treml4Q3LRV9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Treml4Q3LRV9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Treml4Q3LRV9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.87■■□□□ 1.09
Treml4Q3LRV9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Treml4Q3LRV9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Treml4Q3LRV9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Treml4Q3LRV9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.86■■□□□ 1.09
Treml4Q3LRV9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Treml4Q3LRV9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Treml4Q3LRV9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Treml4Q3LRV9 Gm7332-201ENSMUST00000118351 454 ntBASIC21.85■■□□□ 1.09
Treml4Q3LRV9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.85■■□□□ 1.09
Treml4Q3LRV9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Treml4Q3LRV9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Treml4Q3LRV9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Treml4Q3LRV9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Treml4Q3LRV9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Treml4Q3LRV9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Treml4Q3LRV9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.84■■□□□ 1.09
Treml4Q3LRV9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Treml4Q3LRV9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Treml4Q3LRV9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Treml4Q3LRV9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Treml4Q3LRV9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Treml4Q3LRV9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.83■■□□□ 1.09
Treml4Q3LRV9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Treml4Q3LRV9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Treml4Q3LRV9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Treml4Q3LRV9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Treml4Q3LRV9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Treml4Q3LRV9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Treml4Q3LRV9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Treml4Q3LRV9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Treml4Q3LRV9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Treml4Q3LRV9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Treml4Q3LRV9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Treml4Q3LRV9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Treml4Q3LRV9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Treml4Q3LRV9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Treml4Q3LRV9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Treml4Q3LRV9 Gm45364-201ENSMUST00000210883 159 ntBASIC21.78■■□□□ 1.08
Treml4Q3LRV9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Treml4Q3LRV9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Treml4Q3LRV9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Treml4Q3LRV9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Treml4Q3LRV9 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.76■■□□□ 1.07
Treml4Q3LRV9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.76■■□□□ 1.07
Treml4Q3LRV9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Treml4Q3LRV9 Gm37136-201ENSMUST00000194368 194 ntBASIC21.76■■□□□ 1.07
Treml4Q3LRV9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Treml4Q3LRV9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Treml4Q3LRV9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Treml4Q3LRV9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.75■■□□□ 1.07
Treml4Q3LRV9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Treml4Q3LRV9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Treml4Q3LRV9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Treml4Q3LRV9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.73■■□□□ 1.07
Treml4Q3LRV9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Treml4Q3LRV9 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.73■■□□□ 1.07
Treml4Q3LRV9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Treml4Q3LRV9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Treml4Q3LRV9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Treml4Q3LRV9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Treml4Q3LRV9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Treml4Q3LRV9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Treml4Q3LRV9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Treml4Q3LRV9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.71■■□□□ 1.07
Treml4Q3LRV9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Treml4Q3LRV9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Treml4Q3LRV9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.7■■□□□ 1.06
Treml4Q3LRV9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Treml4Q3LRV9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Treml4Q3LRV9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.7■■□□□ 1.06
Treml4Q3LRV9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Treml4Q3LRV9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Treml4Q3LRV9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Treml4Q3LRV9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.69■■□□□ 1.06
Treml4Q3LRV9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Treml4Q3LRV9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Treml4Q3LRV9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.68■■□□□ 1.06
Treml4Q3LRV9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Treml4Q3LRV9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Treml4Q3LRV9 Gm14523-201ENSMUST00000117260 558 ntBASIC21.67■■□□□ 1.06
Treml4Q3LRV9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Treml4Q3LRV9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Treml4Q3LRV9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Treml4Q3LRV9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Treml4Q3LRV9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Treml4Q3LRV9 Gm27502-201ENSMUST00000183495 199 ntBASIC21.66■■□□□ 1.06
Treml4Q3LRV9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms