Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Trim72Q1XH17 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim72Q1XH17 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.88■■□□□ 1.57
Trim72Q1XH17 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Trim72Q1XH17 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Trim72Q1XH17 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim72Q1XH17 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
Trim72Q1XH17 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.86■■□□□ 1.57
Trim72Q1XH17 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.85■■□□□ 1.57
Trim72Q1XH17 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.85■■□□□ 1.57
Trim72Q1XH17 Gm37136-201ENSMUST00000194368 194 ntBASIC24.85■■□□□ 1.57
Trim72Q1XH17 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim72Q1XH17 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim72Q1XH17 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Trim72Q1XH17 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim72Q1XH17 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Trim72Q1XH17 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.56
Trim72Q1XH17 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Trim72Q1XH17 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim72Q1XH17 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim72Q1XH17 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Trim72Q1XH17 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Trim72Q1XH17 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.82■■□□□ 1.56
Trim72Q1XH17 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.82■■□□□ 1.56
Trim72Q1XH17 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Trim72Q1XH17 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim72Q1XH17 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim72Q1XH17 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.81■■□□□ 1.56
Trim72Q1XH17 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.81■■□□□ 1.56
Trim72Q1XH17 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim72Q1XH17 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Trim72Q1XH17 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim72Q1XH17 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim72Q1XH17 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim72Q1XH17 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
Trim72Q1XH17 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
Trim72Q1XH17 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Trim72Q1XH17 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim72Q1XH17 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim72Q1XH17 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim72Q1XH17 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim72Q1XH17 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim72Q1XH17 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim72Q1XH17 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim72Q1XH17 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim72Q1XH17 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim72Q1XH17 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim72Q1XH17 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim72Q1XH17 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Trim72Q1XH17 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim72Q1XH17 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Trim72Q1XH17 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim72Q1XH17 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Trim72Q1XH17 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.73■■□□□ 1.55
Trim72Q1XH17 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim72Q1XH17 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim72Q1XH17 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim72Q1XH17 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim72Q1XH17 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim72Q1XH17 Gm7432-201ENSMUST00000210343 879 ntBASIC24.72■■□□□ 1.55
Trim72Q1XH17 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim72Q1XH17 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim72Q1XH17 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim72Q1XH17 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim72Q1XH17 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim72Q1XH17 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Trim72Q1XH17 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim72Q1XH17 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim72Q1XH17 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.68■■□□□ 1.54
Trim72Q1XH17 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim72Q1XH17 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim72Q1XH17 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim72Q1XH17 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim72Q1XH17 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim72Q1XH17 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.66■■□□□ 1.54
Trim72Q1XH17 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim72Q1XH17 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Trim72Q1XH17 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Trim72Q1XH17 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.65■■□□□ 1.54
Trim72Q1XH17 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim72Q1XH17 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim72Q1XH17 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim72Q1XH17 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Trim72Q1XH17 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim72Q1XH17 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim72Q1XH17 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim72Q1XH17 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Trim72Q1XH17 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim72Q1XH17 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Trim72Q1XH17 Gm11599-201ENSMUST00000118720 878 ntBASIC24.61■■□□□ 1.53
Trim72Q1XH17 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.61■■□□□ 1.53
Trim72Q1XH17 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim72Q1XH17 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim72Q1XH17 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Trim72Q1XH17 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.59■■□□□ 1.53
Trim72Q1XH17 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim72Q1XH17 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim72Q1XH17 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim72Q1XH17 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim72Q1XH17 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms