Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1aP97445 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.8■■□□□ 1.08
Cacna1aP97445 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1aP97445 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.8■■□□□ 1.08
Cacna1aP97445 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1aP97445 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1aP97445 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1aP97445 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Cacna1aP97445 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cacna1aP97445 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cacna1aP97445 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1aP97445 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1aP97445 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1aP97445 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1aP97445 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1aP97445 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1aP97445 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.76■■□□□ 1.07
Cacna1aP97445 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1aP97445 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cacna1aP97445 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.75■■□□□ 1.07
Cacna1aP97445 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.75■■□□□ 1.07
Cacna1aP97445 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1aP97445 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1aP97445 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1aP97445 Gm10420-201ENSMUST00000121713 882 ntBASIC21.73■■□□□ 1.07
Cacna1aP97445 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.73■■□□□ 1.07
Cacna1aP97445 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1aP97445 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cacna1aP97445 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cacna1aP97445 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cacna1aP97445 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cacna1aP97445 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1aP97445 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.71■■□□□ 1.07
Cacna1aP97445 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1aP97445 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.71■■□□□ 1.07
Cacna1aP97445 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1aP97445 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1aP97445 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1aP97445 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.7■■□□□ 1.07
Cacna1aP97445 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cacna1aP97445 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cacna1aP97445 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cacna1aP97445 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.69■■□□□ 1.06
Cacna1aP97445 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.69■■□□□ 1.06
Cacna1aP97445 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1aP97445 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.69■■□□□ 1.06
Cacna1aP97445 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1aP97445 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.68■■□□□ 1.06
Cacna1aP97445 Gm5921-201ENSMUST00000075898 882 ntBASIC21.68■■□□□ 1.06
Cacna1aP97445 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1aP97445 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1aP97445 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cacna1aP97445 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cacna1aP97445 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cacna1aP97445 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cacna1aP97445 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.66■■□□□ 1.06
Cacna1aP97445 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cacna1aP97445 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.66■■□□□ 1.06
Cacna1aP97445 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cacna1aP97445 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.65■■□□□ 1.06
Cacna1aP97445 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1aP97445 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cacna1aP97445 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cacna1aP97445 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cacna1aP97445 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cacna1aP97445 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.63■■□□□ 1.05
Cacna1aP97445 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.63■■□□□ 1.05
Cacna1aP97445 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacna1aP97445 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacna1aP97445 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cacna1aP97445 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cacna1aP97445 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacna1aP97445 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.61■■□□□ 1.05
Cacna1aP97445 Serp2-204ENSMUST00000228055 705 ntBASIC21.61■■□□□ 1.05
Cacna1aP97445 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1aP97445 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.6■■□□□ 1.05
Cacna1aP97445 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1aP97445 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cacna1aP97445 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1aP97445 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.6■■□□□ 1.05
Cacna1aP97445 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1aP97445 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1aP97445 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1aP97445 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1aP97445 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1aP97445 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cacna1aP97445 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1aP97445 Gm9812-201ENSMUST00000061934 968 ntBASIC21.58■■□□□ 1.05
Cacna1aP97445 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Cacna1aP97445 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.58■■□□□ 1.04
Cacna1aP97445 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cacna1aP97445 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Cacna1aP97445 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1aP97445 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1aP97445 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1aP97445 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1aP97445 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cacna1aP97445 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.55■■□□□ 1.04
Cacna1aP97445 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cacna1aP97445 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms