Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox6P40645 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox6P40645 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox6P40645 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox6P40645 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox6P40645 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Sox6P40645 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sox6P40645 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox6P40645 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox6P40645 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Sox6P40645 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox6P40645 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Sox6P40645 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sox6P40645 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox6P40645 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox6P40645 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox6P40645 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox6P40645 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Sox6P40645 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox6P40645 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox6P40645 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox6P40645 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.55■■□□□ 1.04
Sox6P40645 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox6P40645 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Sox6P40645 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox6P40645 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sox6P40645 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sox6P40645 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sox6P40645 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Sox6P40645 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.52■■□□□ 1.04
Sox6P40645 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox6P40645 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox6P40645 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox6P40645 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox6P40645 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.51■■□□□ 1.03
Sox6P40645 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox6P40645 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox6P40645 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox6P40645 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox6P40645 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox6P40645 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox6P40645 Nkain2-201ENSMUST00000092602 558 ntBASIC21.48■■□□□ 1.03
Sox6P40645 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sox6P40645 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Sox6P40645 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Sox6P40645 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox6P40645 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.47■■□□□ 1.03
Sox6P40645 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox6P40645 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox6P40645 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox6P40645 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.46■■□□□ 1.03
Sox6P40645 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.46■■□□□ 1.03
Sox6P40645 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sox6P40645 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox6P40645 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Sox6P40645 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox6P40645 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox6P40645 Gm6821-201ENSMUST00000107540 542 ntBASIC21.44■■□□□ 1.02
Sox6P40645 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.44■■□□□ 1.02
Sox6P40645 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Sox6P40645 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox6P40645 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Sox6P40645 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox6P40645 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.42■■□□□ 1.02
Sox6P40645 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Sox6P40645 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.42■■□□□ 1.02
Sox6P40645 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox6P40645 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox6P40645 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Sox6P40645 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Sox6P40645 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sox6P40645 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox6P40645 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox6P40645 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox6P40645 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.39■■□□□ 1.02
Sox6P40645 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sox6P40645 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.38■■□□□ 1.01
Sox6P40645 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox6P40645 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox6P40645 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox6P40645 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox6P40645 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox6P40645 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.37■■□□□ 1.01
Sox6P40645 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Sox6P40645 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox6P40645 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.36■■□□□ 1.01
Sox6P40645 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox6P40645 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox6P40645 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox6P40645 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
Sox6P40645 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sox6P40645 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox6P40645 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sox6P40645 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox6P40645 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sox6P40645 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.34■■□□□ 1.01
Sox6P40645 Gm30023-201ENSMUST00000197970 889 ntBASIC21.34■■□□□ 1.01
Sox6P40645 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox6P40645 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox6P40645 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms