Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Thbs1P35441 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.5■■□□□ 1.03
Thbs1P35441 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Thbs1P35441 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Thbs1P35441 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.5■■□□□ 1.03
Thbs1P35441 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.5■■□□□ 1.03
Thbs1P35441 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Thbs1P35441 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Thbs1P35441 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Thbs1P35441 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Thbs1P35441 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Thbs1P35441 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.49■■□□□ 1.03
Thbs1P35441 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thbs1P35441 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Thbs1P35441 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.48■■□□□ 1.03
Thbs1P35441 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.48■■□□□ 1.03
Thbs1P35441 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Thbs1P35441 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Thbs1P35441 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Thbs1P35441 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Thbs1P35441 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.47■■□□□ 1.03
Thbs1P35441 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Thbs1P35441 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Thbs1P35441 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Thbs1P35441 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.46■■□□□ 1.03
Thbs1P35441 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Thbs1P35441 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thbs1P35441 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thbs1P35441 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Thbs1P35441 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Thbs1P35441 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Thbs1P35441 Gm8503-201ENSMUST00000118131 455 ntBASIC21.43■■□□□ 1.02
Thbs1P35441 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Thbs1P35441 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.43■■□□□ 1.02
Thbs1P35441 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Thbs1P35441 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Thbs1P35441 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Thbs1P35441 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Thbs1P35441 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Thbs1P35441 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Thbs1P35441 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Thbs1P35441 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Thbs1P35441 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thbs1P35441 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thbs1P35441 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Thbs1P35441 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Thbs1P35441 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.4■■□□□ 1.02
Thbs1P35441 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Thbs1P35441 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Thbs1P35441 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Thbs1P35441 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.39■■□□□ 1.02
Thbs1P35441 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Thbs1P35441 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Thbs1P35441 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Thbs1P35441 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Thbs1P35441 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Thbs1P35441 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Thbs1P35441 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.37■■□□□ 1.01
Thbs1P35441 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.37■■□□□ 1.01
Thbs1P35441 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Thbs1P35441 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Thbs1P35441 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.36■■□□□ 1.01
Thbs1P35441 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Thbs1P35441 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Thbs1P35441 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.34■■□□□ 1.01
Thbs1P35441 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Thbs1P35441 Gm6821-201ENSMUST00000107540 542 ntBASIC21.33■■□□□ 1.01
Thbs1P35441 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.33■■□□□ 1.01
Thbs1P35441 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Thbs1P35441 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Thbs1P35441 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Thbs1P35441 Gm37136-201ENSMUST00000194368 194 ntBASIC21.32■■□□□ 1
Thbs1P35441 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Thbs1P35441 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Thbs1P35441 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Thbs1P35441 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Thbs1P35441 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Thbs1P35441 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Thbs1P35441 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Thbs1P35441 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Thbs1P35441 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Thbs1P35441 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Thbs1P35441 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.3■■□□□ 1
Thbs1P35441 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Thbs1P35441 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Thbs1P35441 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Thbs1P35441 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Thbs1P35441 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Thbs1P35441 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Thbs1P35441 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.28■■□□□ 1
Thbs1P35441 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.28■■□□□ 1
Thbs1P35441 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Thbs1P35441 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Thbs1P35441 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Thbs1P35441 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Thbs1P35441 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.28■■□□□ 1
Thbs1P35441 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Thbs1P35441 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.26■□□□□ 0.99
Thbs1P35441 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thbs1P35441 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms