Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd40P27512 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd40P27512 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cd40P27512 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cd40P27512 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd40P27512 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cd40P27512 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.11■□□□□ 0.97
Cd40P27512 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cd40P27512 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cd40P27512 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cd40P27512 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd40P27512 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd40P27512 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cd40P27512 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cd40P27512 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cd40P27512 Gm11599-201ENSMUST00000118720 878 ntBASIC21.08■□□□□ 0.97
Cd40P27512 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cd40P27512 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd40P27512 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cd40P27512 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Cd40P27512 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd40P27512 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cd40P27512 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd40P27512 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Cd40P27512 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd40P27512 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cd40P27512 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd40P27512 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd40P27512 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Cd40P27512 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.04■□□□□ 0.96
Cd40P27512 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd40P27512 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cd40P27512 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd40P27512 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cd40P27512 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd40P27512 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd40P27512 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd40P27512 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd40P27512 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.02■□□□□ 0.96
Cd40P27512 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cd40P27512 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd40P27512 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cd40P27512 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd40P27512 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Cd40P27512 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Cd40P27512 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd40P27512 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cd40P27512 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd40P27512 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd40P27512 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd40P27512 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cd40P27512 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Cd40P27512 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd40P27512 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cd40P27512 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd40P27512 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd40P27512 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.98■□□□□ 0.95
Cd40P27512 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd40P27512 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd40P27512 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd40P27512 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd40P27512 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd40P27512 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd40P27512 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cd40P27512 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd40P27512 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cd40P27512 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd40P27512 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd40P27512 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd40P27512 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.95■□□□□ 0.95
Cd40P27512 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd40P27512 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cd40P27512 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd40P27512 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.94■□□□□ 0.94
Cd40P27512 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.94■□□□□ 0.94
Cd40P27512 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd40P27512 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd40P27512 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd40P27512 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.93■□□□□ 0.94
Cd40P27512 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd40P27512 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cd40P27512 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cd40P27512 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd40P27512 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cd40P27512 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cd40P27512 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd40P27512 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.91■□□□□ 0.94
Cd40P27512 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd40P27512 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd40P27512 Gm4799-201ENSMUST00000095396 657 ntBASIC20.9■□□□□ 0.94
Cd40P27512 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd40P27512 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd40P27512 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cd40P27512 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd40P27512 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.88■□□□□ 0.93
Cd40P27512 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cd40P27512 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cd40P27512 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cd40P27512 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.88■□□□□ 0.93
Cd40P27512 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms