Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ChrneP20782 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ChrneP20782 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ChrneP20782 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ChrneP20782 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ChrneP20782 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.91■■□□□ 1.1
ChrneP20782 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ChrneP20782 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
ChrneP20782 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ChrneP20782 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
ChrneP20782 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ChrneP20782 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ChrneP20782 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.89■■□□□ 1.09
ChrneP20782 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ChrneP20782 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ChrneP20782 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ChrneP20782 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
ChrneP20782 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ChrneP20782 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
ChrneP20782 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ChrneP20782 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ChrneP20782 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ChrneP20782 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.85■■□□□ 1.09
ChrneP20782 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ChrneP20782 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.84■■□□□ 1.09
ChrneP20782 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ChrneP20782 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
ChrneP20782 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ChrneP20782 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
ChrneP20782 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.83■■□□□ 1.09
ChrneP20782 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
ChrneP20782 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ChrneP20782 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ChrneP20782 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ChrneP20782 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ChrneP20782 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ChrneP20782 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ChrneP20782 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ChrneP20782 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.8■■□□□ 1.08
ChrneP20782 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.8■■□□□ 1.08
ChrneP20782 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ChrneP20782 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ChrneP20782 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ChrneP20782 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ChrneP20782 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.79■■□□□ 1.08
ChrneP20782 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
ChrneP20782 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ChrneP20782 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
ChrneP20782 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ChrneP20782 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ChrneP20782 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ChrneP20782 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ChrneP20782 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ChrneP20782 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ChrneP20782 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ChrneP20782 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ChrneP20782 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ChrneP20782 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
ChrneP20782 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ChrneP20782 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ChrneP20782 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ChrneP20782 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ChrneP20782 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.7■■□□□ 1.06
ChrneP20782 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ChrneP20782 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.69■■□□□ 1.06
ChrneP20782 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ChrneP20782 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ChrneP20782 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.68■■□□□ 1.06
ChrneP20782 Gm37136-201ENSMUST00000194368 194 ntBASIC21.68■■□□□ 1.06
ChrneP20782 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ChrneP20782 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ChrneP20782 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ChrneP20782 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.67■■□□□ 1.06
ChrneP20782 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ChrneP20782 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ChrneP20782 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ChrneP20782 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ChrneP20782 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
ChrneP20782 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ChrneP20782 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.65■■□□□ 1.06
ChrneP20782 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ChrneP20782 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ChrneP20782 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ChrneP20782 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ChrneP20782 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ChrneP20782 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ChrneP20782 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.63■■□□□ 1.05
ChrneP20782 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ChrneP20782 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ChrneP20782 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
ChrneP20782 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
ChrneP20782 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ChrneP20782 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ChrneP20782 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ChrneP20782 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ChrneP20782 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ChrneP20782 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ChrneP20782 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ChrneP20782 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.59■■□□□ 1.05
ChrneP20782 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms