Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06323 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06323 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
P06323 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06323 Gm30023-201ENSMUST00000197970 889 ntBASIC18.66■□□□□ 0.58
P06323 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.66■□□□□ 0.58
P06323 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06323 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
P06323 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
P06323 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06323 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
P06323 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P06323 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
P06323 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.64■□□□□ 0.58
P06323 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
P06323 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P06323 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P06323 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P06323 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
P06323 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06323 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
P06323 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P06323 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06323 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06323 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06323 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06323 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06323 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
P06323 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06323 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P06323 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
P06323 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P06323 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P06323 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P06323 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.6■□□□□ 0.57
P06323 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P06323 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
P06323 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P06323 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P06323 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P06323 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P06323 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P06323 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P06323 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P06323 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
P06323 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.58■□□□□ 0.56
P06323 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06323 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06323 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06323 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06323 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06323 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06323 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P06323 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P06323 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.57■□□□□ 0.56
P06323 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P06323 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
P06323 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P06323 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06323 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P06323 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P06323 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P06323 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P06323 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.55■□□□□ 0.56
P06323 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.55■□□□□ 0.56
P06323 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P06323 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P06323 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
P06323 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.53■□□□□ 0.56
P06323 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P06323 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P06323 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P06323 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P06323 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P06323 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
P06323 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P06323 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.52■□□□□ 0.56
P06323 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
P06323 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
P06323 Particl-201ENSMUST00000205370 1560 ntBASIC18.51■□□□□ 0.55
P06323 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.5■□□□□ 0.55
P06323 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
P06323 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P06323 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P06323 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P06323 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.49■□□□□ 0.55
P06323 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
P06323 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06323 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.48■□□□□ 0.55
P06323 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06323 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06323 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06323 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06323 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06323 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P06323 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.47■□□□□ 0.55
P06323 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P06323 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
P06323 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
P06323 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms