Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01852 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.2■□□□□ 0.98
P01852 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
P01852 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
P01852 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01852 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
P01852 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P01852 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.16■□□□□ 0.98
P01852 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P01852 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
P01852 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
P01852 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.15■□□□□ 0.98
P01852 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
P01852 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
P01852 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P01852 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P01852 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P01852 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P01852 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P01852 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
P01852 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
P01852 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
P01852 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P01852 Gm37136-201ENSMUST00000194368 194 ntBASIC21.11■□□□□ 0.97
P01852 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01852 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.1■□□□□ 0.97
P01852 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01852 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
P01852 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01852 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01852 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
P01852 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
P01852 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01852 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
P01852 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01852 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
P01852 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P01852 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.08■□□□□ 0.97
P01852 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01852 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01852 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01852 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
P01852 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01852 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01852 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.06■□□□□ 0.96
P01852 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.06■□□□□ 0.96
P01852 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01852 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
P01852 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P01852 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P01852 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
P01852 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
P01852 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
P01852 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P01852 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
P01852 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
P01852 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P01852 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.02■□□□□ 0.95
P01852 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P01852 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P01852 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
P01852 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.01■□□□□ 0.95
P01852 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
P01852 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
P01852 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P01852 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P01852 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21■□□□□ 0.95
P01852 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.99■□□□□ 0.95
P01852 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
P01852 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
P01852 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
P01852 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01852 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
P01852 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.98■□□□□ 0.95
P01852 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.98■□□□□ 0.95
P01852 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01852 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01852 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
P01852 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01852 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
P01852 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01852 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P01852 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P01852 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
P01852 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.95■□□□□ 0.94
P01852 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P01852 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P01852 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.94■□□□□ 0.94
P01852 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.93■□□□□ 0.94
P01852 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
P01852 Gm4799-201ENSMUST00000095396 657 ntBASIC20.93■□□□□ 0.94
P01852 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P01852 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P01852 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
P01852 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
P01852 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P01852 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
P01852 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P01852 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
P01852 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms