Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac3O88895 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac3O88895 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac3O88895 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac3O88895 Nkain2-201ENSMUST00000092602 558 ntBASIC20.59■□□□□ 0.89
Hdac3O88895 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac3O88895 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac3O88895 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Hdac3O88895 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac3O88895 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac3O88895 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.58■□□□□ 0.88
Hdac3O88895 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac3O88895 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Hdac3O88895 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac3O88895 Gm30023-201ENSMUST00000197970 889 ntBASIC20.57■□□□□ 0.88
Hdac3O88895 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.56■□□□□ 0.88
Hdac3O88895 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Hdac3O88895 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac3O88895 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac3O88895 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Hdac3O88895 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.55■□□□□ 0.88
Hdac3O88895 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac3O88895 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac3O88895 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac3O88895 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.54■□□□□ 0.88
Hdac3O88895 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac3O88895 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac3O88895 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac3O88895 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac3O88895 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Hdac3O88895 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac3O88895 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Hdac3O88895 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac3O88895 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hdac3O88895 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac3O88895 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.52■□□□□ 0.88
Hdac3O88895 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac3O88895 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac3O88895 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.52■□□□□ 0.88
Hdac3O88895 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hdac3O88895 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac3O88895 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.51■□□□□ 0.87
Hdac3O88895 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac3O88895 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.51■□□□□ 0.87
Hdac3O88895 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac3O88895 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac3O88895 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac3O88895 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac3O88895 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac3O88895 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Hdac3O88895 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac3O88895 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac3O88895 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac3O88895 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.5■□□□□ 0.87
Hdac3O88895 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Hdac3O88895 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac3O88895 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Hdac3O88895 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.49■□□□□ 0.87
Hdac3O88895 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac3O88895 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac3O88895 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Hdac3O88895 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac3O88895 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hdac3O88895 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.47■□□□□ 0.87
Hdac3O88895 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac3O88895 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Hdac3O88895 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.46■□□□□ 0.87
Hdac3O88895 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac3O88895 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac3O88895 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.46■□□□□ 0.87
Hdac3O88895 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac3O88895 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac3O88895 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac3O88895 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.45■□□□□ 0.86
Hdac3O88895 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.45■□□□□ 0.86
Hdac3O88895 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac3O88895 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac3O88895 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac3O88895 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hdac3O88895 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac3O88895 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac3O88895 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac3O88895 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac3O88895 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac3O88895 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.43■□□□□ 0.86
Hdac3O88895 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac3O88895 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Hdac3O88895 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac3O88895 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hdac3O88895 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac3O88895 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac3O88895 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac3O88895 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac3O88895 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Hdac3O88895 Gm8503-201ENSMUST00000118131 455 ntBASIC20.4■□□□□ 0.86
Hdac3O88895 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac3O88895 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac3O88895 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac3O88895 Gm6821-201ENSMUST00000107540 542 ntBASIC20.39■□□□□ 0.85
Hdac3O88895 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms