Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Scarna2-201ENSMUST00000157560 414 ntBASIC25.67■■□□□ 1.7
Apba3O88888 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.67■■□□□ 1.7
Apba3O88888 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.67■■□□□ 1.7
Apba3O88888 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Apba3O88888 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Apba3O88888 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Apba3O88888 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.65■■□□□ 1.7
Apba3O88888 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Apba3O88888 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Apba3O88888 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Apba3O88888 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Apba3O88888 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.63■■□□□ 1.69
Apba3O88888 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.63■■□□□ 1.69
Apba3O88888 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Apba3O88888 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Apba3O88888 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.62■■□□□ 1.69
Apba3O88888 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Apba3O88888 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Apba3O88888 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Apba3O88888 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Apba3O88888 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.61■■□□□ 1.69
Apba3O88888 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Apba3O88888 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.61■■□□□ 1.69
Apba3O88888 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Apba3O88888 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Apba3O88888 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Apba3O88888 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Apba3O88888 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.59■■□□□ 1.69
Apba3O88888 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.59■■□□□ 1.69
Apba3O88888 Gm16437-201ENSMUST00000025669 507 ntBASIC25.59■■□□□ 1.69
Apba3O88888 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.57■■□□□ 1.68
Apba3O88888 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Apba3O88888 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.57■■□□□ 1.68
Apba3O88888 Gm9806-201ENSMUST00000051080 552 ntBASIC25.57■■□□□ 1.68
Apba3O88888 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Apba3O88888 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Apba3O88888 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Apba3O88888 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Apba3O88888 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Apba3O88888 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Apba3O88888 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.55■■□□□ 1.68
Apba3O88888 Cap2-205ENSMUST00000225824 1634 ntBASIC25.55■■□□□ 1.68
Apba3O88888 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.54■■□□□ 1.68
Apba3O88888 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Apba3O88888 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Apba3O88888 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Apba3O88888 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Apba3O88888 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Apba3O88888 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Apba3O88888 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Apba3O88888 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Apba3O88888 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Apba3O88888 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Apba3O88888 Gm11687-201ENSMUST00000118911 886 ntBASIC25.52■■□□□ 1.68
Apba3O88888 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Apba3O88888 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Apba3O88888 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Apba3O88888 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Apba3O88888 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Apba3O88888 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Apba3O88888 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Apba3O88888 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Apba3O88888 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Apba3O88888 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Apba3O88888 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Apba3O88888 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Apba3O88888 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Apba3O88888 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Apba3O88888 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Apba3O88888 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.47■■□□□ 1.67
Apba3O88888 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Apba3O88888 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Apba3O88888 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.45■■□□□ 1.66
Apba3O88888 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Apba3O88888 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.45■■□□□ 1.66
Apba3O88888 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Apba3O88888 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Apba3O88888 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Apba3O88888 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.44■■□□□ 1.66
Apba3O88888 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Apba3O88888 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Apba3O88888 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Apba3O88888 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Apba3O88888 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Apba3O88888 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Apba3O88888 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.43■■□□□ 1.66
Apba3O88888 Gm9812-201ENSMUST00000061934 968 ntBASIC25.43■■□□□ 1.66
Apba3O88888 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Apba3O88888 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Apba3O88888 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Apba3O88888 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Apba3O88888 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Apba3O88888 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Apba3O88888 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.41■■□□□ 1.66
Apba3O88888 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Apba3O88888 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.41■■□□□ 1.66
Apba3O88888 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.41■■□□□ 1.66
Apba3O88888 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Apba3O88888 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Apba3O88888 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.39■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms