Protein–RNA interactions for Protein: J3QPK1

Gm21833, Predicted gene, 21833, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21833J3QPK1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Gm21833J3QPK1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm21833J3QPK1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm21833J3QPK1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm21833J3QPK1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm21833J3QPK1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm21833J3QPK1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm21833J3QPK1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm21833J3QPK1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm21833J3QPK1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gm21833J3QPK1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm21833J3QPK1 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.31■□□□□ 0.84
Gm21833J3QPK1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm21833J3QPK1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm21833J3QPK1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm21833J3QPK1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm21833J3QPK1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm21833J3QPK1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm21833J3QPK1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm21833J3QPK1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm21833J3QPK1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm21833J3QPK1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm21833J3QPK1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.29■□□□□ 0.84
Gm21833J3QPK1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm21833J3QPK1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm21833J3QPK1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Gm21833J3QPK1 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.28■□□□□ 0.84
Gm21833J3QPK1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm21833J3QPK1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm21833J3QPK1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm21833J3QPK1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gm21833J3QPK1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm21833J3QPK1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm21833J3QPK1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm21833J3QPK1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm21833J3QPK1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm21833J3QPK1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm21833J3QPK1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm21833J3QPK1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.26■□□□□ 0.83
Gm21833J3QPK1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm21833J3QPK1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Gm21833J3QPK1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm21833J3QPK1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm21833J3QPK1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm21833J3QPK1 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.25■□□□□ 0.83
Gm21833J3QPK1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gm21833J3QPK1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gm21833J3QPK1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm21833J3QPK1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Gm21833J3QPK1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Gm21833J3QPK1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.24■□□□□ 0.83
Gm21833J3QPK1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Gm21833J3QPK1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Gm21833J3QPK1 Zfp131-205ENSMUST00000223812 663 ntBASIC20.23■□□□□ 0.83
Gm21833J3QPK1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm21833J3QPK1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm21833J3QPK1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm21833J3QPK1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm21833J3QPK1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm21833J3QPK1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm21833J3QPK1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.22■□□□□ 0.83
Gm21833J3QPK1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm21833J3QPK1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm21833J3QPK1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm21833J3QPK1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm21833J3QPK1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm21833J3QPK1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gm21833J3QPK1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.2■□□□□ 0.82
Gm21833J3QPK1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm21833J3QPK1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm21833J3QPK1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm21833J3QPK1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm21833J3QPK1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.19■□□□□ 0.82
Gm21833J3QPK1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm21833J3QPK1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm21833J3QPK1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm21833J3QPK1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm21833J3QPK1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm21833J3QPK1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm21833J3QPK1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm21833J3QPK1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm21833J3QPK1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.16■□□□□ 0.82
Gm21833J3QPK1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm21833J3QPK1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm21833J3QPK1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm21833J3QPK1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Gm21833J3QPK1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm21833J3QPK1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm21833J3QPK1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm21833J3QPK1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm21833J3QPK1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms