Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4lE9Q2N0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cpsf4lE9Q2N0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf4lE9Q2N0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.78■□□□□ 0.76
Cpsf4lE9Q2N0 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.78■□□□□ 0.76
Cpsf4lE9Q2N0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cpsf4lE9Q2N0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4lE9Q2N0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4lE9Q2N0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4lE9Q2N0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4lE9Q2N0 Gm7432-201ENSMUST00000210343 879 ntBASIC19.77■□□□□ 0.76
Cpsf4lE9Q2N0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf4lE9Q2N0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf4lE9Q2N0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cpsf4lE9Q2N0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf4lE9Q2N0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4lE9Q2N0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4lE9Q2N0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf4lE9Q2N0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf4lE9Q2N0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf4lE9Q2N0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf4lE9Q2N0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf4lE9Q2N0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf4lE9Q2N0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf4lE9Q2N0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf4lE9Q2N0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf4lE9Q2N0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Cpsf4lE9Q2N0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf4lE9Q2N0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.72■□□□□ 0.75
Cpsf4lE9Q2N0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf4lE9Q2N0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4lE9Q2N0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4lE9Q2N0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4lE9Q2N0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf4lE9Q2N0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Cpsf4lE9Q2N0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Cpsf4lE9Q2N0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf4lE9Q2N0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf4lE9Q2N0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Cpsf4lE9Q2N0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf4lE9Q2N0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4lE9Q2N0 Gm11599-201ENSMUST00000118720 878 ntBASIC19.68■□□□□ 0.74
Cpsf4lE9Q2N0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf4lE9Q2N0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cpsf4lE9Q2N0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf4lE9Q2N0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.67■□□□□ 0.74
Cpsf4lE9Q2N0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf4lE9Q2N0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf4lE9Q2N0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.66■□□□□ 0.74
Cpsf4lE9Q2N0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4lE9Q2N0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4lE9Q2N0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4lE9Q2N0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf4lE9Q2N0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cpsf4lE9Q2N0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpsf4lE9Q2N0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf4lE9Q2N0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf4lE9Q2N0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4lE9Q2N0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4lE9Q2N0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4lE9Q2N0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf4lE9Q2N0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4lE9Q2N0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.62■□□□□ 0.73
Cpsf4lE9Q2N0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4lE9Q2N0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4lE9Q2N0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf4lE9Q2N0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4lE9Q2N0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4lE9Q2N0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4lE9Q2N0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf4lE9Q2N0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.61■□□□□ 0.73
Cpsf4lE9Q2N0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Cpsf4lE9Q2N0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf4lE9Q2N0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf4lE9Q2N0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4lE9Q2N0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4lE9Q2N0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4lE9Q2N0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4lE9Q2N0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf4lE9Q2N0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf4lE9Q2N0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf4lE9Q2N0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf4lE9Q2N0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf4lE9Q2N0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cpsf4lE9Q2N0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cpsf4lE9Q2N0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4lE9Q2N0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4lE9Q2N0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf4lE9Q2N0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cpsf4lE9Q2N0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cpsf4lE9Q2N0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4lE9Q2N0 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.54■□□□□ 0.72
Cpsf4lE9Q2N0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4lE9Q2N0 Gm4799-201ENSMUST00000095396 657 ntBASIC19.54■□□□□ 0.72
Cpsf4lE9Q2N0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4lE9Q2N0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf4lE9Q2N0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4lE9Q2N0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4lE9Q2N0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf4lE9Q2N0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 336.8 ms