Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm26115-201ENSMUST00000175605 87 ntBASIC18.77■□□□□ 0.6
Gm12887B1AVM1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Gm12887B1AVM1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm12887B1AVM1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm12887B1AVM1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm12887B1AVM1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm12887B1AVM1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm12887B1AVM1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm12887B1AVM1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm12887B1AVM1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm12887B1AVM1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm12887B1AVM1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm12887B1AVM1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm12887B1AVM1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm12887B1AVM1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm12887B1AVM1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm12887B1AVM1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm12887B1AVM1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm12887B1AVM1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm12887B1AVM1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm12887B1AVM1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm12887B1AVM1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Gm8109-201ENSMUST00000194076 746 ntBASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.64■□□□□ 0.58
Gm12887B1AVM1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm12887B1AVM1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm12887B1AVM1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm12887B1AVM1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm12887B1AVM1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm12887B1AVM1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm12887B1AVM1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms