Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm26115-201ENSMUST00000175605 87 ntBASIC18.77■□□□□ 0.6
Gm12887B1AVM1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Gm12887B1AVM1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm12887B1AVM1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm12887B1AVM1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm12887B1AVM1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm12887B1AVM1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm12887B1AVM1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm12887B1AVM1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm12887B1AVM1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm12887B1AVM1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm12887B1AVM1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm12887B1AVM1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm12887B1AVM1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm12887B1AVM1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm12887B1AVM1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm12887B1AVM1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm12887B1AVM1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm12887B1AVM1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm12887B1AVM1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm12887B1AVM1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm12887B1AVM1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm12887B1AVM1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm12887B1AVM1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm12887B1AVM1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm12887B1AVM1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm12887B1AVM1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Gm8109-201ENSMUST00000194076 746 ntBASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm12887B1AVM1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm12887B1AVM1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.64■□□□□ 0.58
Gm12887B1AVM1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm12887B1AVM1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm12887B1AVM1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm12887B1AVM1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm12887B1AVM1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm12887B1AVM1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm12887B1AVM1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm12887B1AVM1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm12887B1AVM1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm12887B1AVM1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms