Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.64■□□□□ 0.57
Trav13n-4A0A0G2JG01 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav13n-4A0A0G2JG01 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav13n-4A0A0G2JG01 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav13n-4A0A0G2JG01 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13n-4A0A0G2JG01 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13n-4A0A0G2JG01 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13n-4A0A0G2JG01 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13n-4A0A0G2JG01 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.62■□□□□ 0.57
Trav13n-4A0A0G2JG01 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Trav13n-4A0A0G2JG01 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trav13n-4A0A0G2JG01 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trav13n-4A0A0G2JG01 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Trav13n-4A0A0G2JG01 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav13n-4A0A0G2JG01 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav13n-4A0A0G2JG01 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.61■□□□□ 0.57
Trav13n-4A0A0G2JG01 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav13n-4A0A0G2JG01 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13n-4A0A0G2JG01 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13n-4A0A0G2JG01 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav13n-4A0A0G2JG01 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13n-4A0A0G2JG01 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13n-4A0A0G2JG01 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
Trav13n-4A0A0G2JG01 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.59■□□□□ 0.57
Trav13n-4A0A0G2JG01 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.59■□□□□ 0.57
Trav13n-4A0A0G2JG01 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13n-4A0A0G2JG01 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13n-4A0A0G2JG01 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.58■□□□□ 0.57
Trav13n-4A0A0G2JG01 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav13n-4A0A0G2JG01 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav13n-4A0A0G2JG01 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trav13n-4A0A0G2JG01 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav13n-4A0A0G2JG01 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav13n-4A0A0G2JG01 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav13n-4A0A0G2JG01 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav13n-4A0A0G2JG01 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav13n-4A0A0G2JG01 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav13n-4A0A0G2JG01 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav13n-4A0A0G2JG01 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav13n-4A0A0G2JG01 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav13n-4A0A0G2JG01 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav13n-4A0A0G2JG01 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav13n-4A0A0G2JG01 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav13n-4A0A0G2JG01 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav13n-4A0A0G2JG01 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav13n-4A0A0G2JG01 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav13n-4A0A0G2JG01 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Trav13n-4A0A0G2JG01 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav13n-4A0A0G2JG01 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav13n-4A0A0G2JG01 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.52■□□□□ 0.56
Trav13n-4A0A0G2JG01 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav13n-4A0A0G2JG01 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trav13n-4A0A0G2JG01 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav13n-4A0A0G2JG01 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav13n-4A0A0G2JG01 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav13n-4A0A0G2JG01 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav13n-4A0A0G2JG01 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav13n-4A0A0G2JG01 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trav13n-4A0A0G2JG01 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Trav13n-4A0A0G2JG01 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav13n-4A0A0G2JG01 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav13n-4A0A0G2JG01 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav13n-4A0A0G2JG01 Mir6538-201ENSMUST00000183713 110 ntBASIC18.5■□□□□ 0.55
Trav13n-4A0A0G2JG01 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav13n-4A0A0G2JG01 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav13n-4A0A0G2JG01 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Trav13n-4A0A0G2JG01 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav13n-4A0A0G2JG01 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Trav13n-4A0A0G2JG01 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav13n-4A0A0G2JG01 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav13n-4A0A0G2JG01 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav13n-4A0A0G2JG01 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav13n-4A0A0G2JG01 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav13n-4A0A0G2JG01 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav13n-4A0A0G2JG01 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.47■□□□□ 0.55
Trav13n-4A0A0G2JG01 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav13n-4A0A0G2JG01 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trav13n-4A0A0G2JG01 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trav13n-4A0A0G2JG01 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav13n-4A0A0G2JG01 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav13n-4A0A0G2JG01 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav13n-4A0A0G2JG01 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav13n-4A0A0G2JG01 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav13n-4A0A0G2JG01 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav13n-4A0A0G2JG01 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav13n-4A0A0G2JG01 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13n-4A0A0G2JG01 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13n-4A0A0G2JG01 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav13n-4A0A0G2JG01 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13n-4A0A0G2JG01 Gm11175-201ENSMUST00000116172 543 ntBASIC18.43■□□□□ 0.54
Trav13n-4A0A0G2JG01 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13n-4A0A0G2JG01 Gm6311-201ENSMUST00000073790 878 ntBASIC18.43■□□□□ 0.54
Trav13n-4A0A0G2JG01 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13n-4A0A0G2JG01 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13n-4A0A0G2JG01 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13n-4A0A0G2JG01 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13n-4A0A0G2JG01 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav13n-4A0A0G2JG01 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13n-4A0A0G2JG01 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13n-4A0A0G2JG01 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms